Scomber japonicus (chub mackerel): 128377294
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Entry
128377294 CDS
T09718
Name
(RefSeq) claudin-20-like
KO
K06087
claudin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03272
Virion - Hepatitis viruses
sjo04382
Cornified envelope formation
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128377294
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128377294
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128377294
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128377294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128377294
04147 Exosome [BR:
sjo04147
]
128377294
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128377294
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
128377294
Exosomal proteins of colorectal cancer cells
128377294
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
128377294
NCBI-ProteinID:
XP_053193193
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All DBs
Position
17:complement(7978965..7979801)
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AA seq
278 aa
AA seq
DB search
MLSTAIQILAFALALLGVLGATVATLLPNWKVSSNVWSSIMTPISQMQGLWMDCVWYSSG
VFSCTMKNSVLSLPAYLQTMRAGMVLSCIVALFGLCLASLGLKCTRWGGSHRAKGHTAMA
AGGCFILASALCLVPASWFTNEVITTFLTTDLPDSSKYQPGGALCVTFISAGFLLAGGVI
FCLSCPGRRTTTTDYPSPFDPNRSLPYGEEQRRREPKAECKHSKNRLNKTVKLQMDEVKR
EKPPQEKPEQDKEQKSYSSPSKLPPKDIKDSYSLQEYV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccaccgccattcagatcctggcgttcgccttggcactcctgggcgtcctcggt
gccaccgtggccactctgctacccaactggaaggtgagctccaacgtctggtccagcatc
atgacccccatctctcaaatgcagggtctttggatggactgcgtctggtacagctccggc
gtcttcagctgcaccatgaagaactcggtgctgtcactgccggcgtatctgcagaccatg
agggccggcatggtcctgtcatgcatcgtggcattgtttggactgtgcctcgcctccctg
gggctcaaatgcacccggtgggggggtagtcaccgagcgaagggacacaccgccatggct
gcagggggttgcttcatcctggccagcgctctatgccttgtccccgcatcttggttcacc
aacgaagtcatcaccaccttcctgaccaccgatctgccggacagcagcaaatatcagcct
ggaggagctctatgcgtcacgttcatctccgccggcttcctcttggctgggggagtcatt
ttttgtttgtcgtgtccaggaagaagaacaacaacaacggactacccttccccgtttgac
cctaacagaagtctgccatacggagaggagcaacggaggcgggagccgaaagcggagtgc
aaacattcgaaaaacaggctaaacaaaacagttaaactgcagatggacgaggtgaagcgg
gagaaacctcctcaggagaaaccggaacaggataaagagcaaaagagctactcgtctcct
tccaaactccctccaaaagacatcaaggacagctacagcctccaggagtacgtttaa
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