Scomber japonicus (chub mackerel): 128377304 Help Entry 128377304         CDS       T09718                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03040   Spliceosome Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     128377304 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:sjo03041]     128377304 (cdc40) Spliceosome [BR:sjo03041]  Complex C   Other components    Step II factors     128377304 (cdc40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 EIF3I WDR55 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 Beta-prop_IFT140_1st Motif Other DBs NCBI-GeneID:  128377304 NCBI-ProteinID:  XP_053193204 LinkDB All DBs Position 17:17854430..17871448 Genome browser AA seq 581 aa AA seqDB search MSAAVSSLVSYGSNSDSEDESETKIDAKKVDPNDPDATAHLKPLQQGHTMSVALLNSAPE VAVKESVETGVHLDPSLKEVTYNPTFETMFAPEFGPQNPFKTQQMAAPRNMLSGYAEPAH VNDFMFEQQRRTFSTYGYALDPSVDTHTVATTGYIGAVEEAEKNKGLTVFETGHKKSEKR KKIKGGDAAEIDNFLGPWAKYMDEKDVAKPSEDEQKELDEITAKRQKKGRNEEEAPAEEK TILHVKDMYDYQGRSYLHVPQDVGINLRSAEAPDKCYLPKKQIHVWSGHTKGVSAIRLFP SSGHLLLSSSMDCKIKLWEVYGERRCIRTFIGHSKAVRDICFNNTGTQFLSAAYDRYLKL WDTETGQCISRFTNRKVPYCVKFNPDEEKQNLFVAGMSDKKIVQWDSRTGEVVQEYDRHL GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC QSMDNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK TTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atgtctgccgccgtaagctccctcgtttcctacggtagcaactcagattcagaagatgaa tcggaaactaagattgatgcaaagaaagtggacccgaacgacccggacgccacggctcac cttaaacctttgcagcaaggacatacgatgtctgtggctttgctcaattctgccccggag gtcgccgttaaggagtctgttgagaccggcgtacatctggacccttcattgaaagaagtc acctataacccaacatttgaaaccatgtttgccccagagtttggtcctcaaaacccgttt aaaacgcagcagatggctgccccaaggaacatgttatctggctacgcagaacctgctcac gtcaacgactttatgtttgaacagcaaaggaggaccttctcaacctatggttatgcttta gatccatctgttgacacacacacagtagccactactggctacattggtgcagtggaagag gctgagaaaaataaaggtctaactgtgtttgagactggacataagaagtcagagaaaagg aaaaagatcaaaggaggggatgcagcagagattgacaacttccttgggccgtgggcgaaa tatatggatgagaaagatgtggccaaaccatcagaggatgagcagaaggagctggatgag atcacagccaaaaggcagaagaagggaaggaatgaagaagaagctccagcagaagagaag actattctccatgttaaagacatgtatgattaccagggcaggtcatacctccacgtccct caggatgtgggtatcaacctgcgttctgcagaagctccagacaagtgttacctgcctaag aaacagattcatgtttggtcaggacataccaagggtgtcagtgctattcgactgttccca agctctggtcatctcctgctctccagctccatggactgtaagatcaagctgtgggaggtg tacggagagaggaggtgtatacggacgtttatcggtcacagcaaggcagtgcgagacatt tgcttcaacaacaccggcactcagttcctcagcgctgcctatgaccgctaccttaaactg tgggacactgagacaggccaatgcatctcccgcttcaccaacaggaaggtaccatactgc gtcaagttcaacccagatgaggaaaaacagaacctttttgtggccggcatgtcagataaa aagattgttcagtgggacagcaggacgggcgaggtggttcaggagtacgaccgtcacctg ggagccgtcaacaccatcacatttgttgatgagaaccgtcggtttgtcagcacatcagac gacaagagtcttcgagtttgggagtgggacatccctgtggacttcaagtacatcgctgag cccagtatgcactcaatgccagctgtgactctttctcccaacggtaagtggcttgcgtgt cagtccatggacaaccagattctgatctttggagcccaaaaccgcttcagactgaataag aagaaggtcttcaagggccacatggtggctggctatgcatgccaagtggacttctctcca gacatgagttatgtggtgtcaggagatgcagatggaaagctgaacatttgggactggaag actacaaagctttaccacaggatcaaggctcatgacaaggtgtgcatcagtgccctgtgg catccacatgaaacctctaaggtcatcacatgtggctgggacggacaaatcaaactctgg gattag

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