Scomber japonicus (chub mackerel): 128377322
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Entry
128377322 CDS
T09718
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128377322 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
Patched domain-containing proteins
128377322 (ptchd4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
128377322
NCBI-ProteinID:
XP_053193230
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All DBs
Position
17:31553372..31600611
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AA seq
865 aa
AA seq
DB search
MCFLGGDGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLR
NHGPVVQDAIAERWENEFCALVSRLSTVEAIHVPDQLHIQSLTSFSLWRDFHQTGVLAKG
EVLVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLL
GIPFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGA
SPFTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYL
DRQPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYA
SFSFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQ
EHLKTLSHGFNKISWMDNFFHYLRVVNVSASTKNDFITILKGSFLRSPEYQHFTEDIIFS
KNRETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRY
SSSVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSI
SILCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPL
VFVPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcttaggaggagacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcgttttactggctgggcttattcgttagcagg
caccccgttttcttcctcactgtccccgcggtcctcaccatcattttcggatctaccgtg
ctcagccgattcaagccggagacggacctggaggtgctggtcgccccgactcacagcctc
gccaagatcgagaggagtctcgccaacagcctgtttcccatcgaccagtcgaagcacaag
ctgtactcggatttgcacaccccgggcagatatggcaggctgatcctgctggccaagtcc
ggggggaacatcctggagctggccgaccaggtcttgcaggtccacaagcaggtgttggat
ttgcgcgacggccgtgtgtccttcatcggccaccagctgggtggcgtgtccttctcaccc
aacagccgtgaccagcaggtcaagttcgcccgtgctgtccagatcacttactacctccgc
aaccatgggccagtggtgcaggatgccatcgctgaacgctgggagaatgaattctgcgcc
ctggtcagccggctgtccacagtcgaggcaattcatgtgcctgaccagctgcacatccag
tcgctcacttccttcagcctgtggcgggacttccaccagacgggcgtgctggccaagggg
gaggtgctggtcagcctggtgctggtgctcctggccgccaccatctccagctccatgcgg
gactgcctgagggggaagccgttcctgggcctcctgggcgtgctgacgatatgcatcgct
aacgtgacagctgcagggatctttttcatatcggacgggaagttcaactccacgctgctg
gggatcccgttctttgccatgggccatggaaccaaaggggtgttcgagctgctggcaggc
tggaggagaacaagggaaaacctaccctttaaagagcgtgtggcagatgcttttgctgat
gtgatggtgtgctacaccatgaccagctcactctacatcatcacatttggcatgggagct
agtcctttcaccaacattgagtcagtgaagattttctgccagagcatgtgtgtcgcaatc
ctggtcaactacttttacgttttctcgttctatggctcctgtctggtgtttgctggacaa
ctggagcagaatcgctaccacagtgttttctgttgtaaaatcccctctgtggaatacttg
gaccgccagcccacatggtttaaaaccatgatgagtgatggccatgacttgtccacacac
cacgacagtgtcccctaccagaatcacttcatccagcacttcctgcgtgagcactacaca
gaatggattaccaacacctatgtcaaaccctttgtggtcattctgtatcttatctatgcc
tctttttcattcatgggatgtttacaaatcagtgatggatcaaacattgtgaacctgctg
gctagtaactctccaagtgtttcgtatgctctgacccagcagaaatacttcagcaactac
agtcctgtgattggattttacatttacgagcccattgagtactggaactccacagtgcag
gagcacctaaagactctgagccatggcttcaacaagatctcctggatggacaactttttc
cactacctacgggtggtgaatgtgagtgcatcaaccaagaacgacttcatcaccatcctc
aagggctcgttcctgcgcagcccagagtaccagcacttcactgaggacataatattctcc
aagaaccgtgagactgatgaatatgacattatcgcctcacgcatgtatttggtggcacgg
accacagagaagaaacgcgaggaggtggtggagcttcttgagaagcttcgtccattgatg
ctgataaacagcataaagttcattgccttcaatcccacgtttgtgtttatggaccgctac
agctcgtccgtcatctcgcccatccttacctcaggcttcagcgtactcaccatcctcatc
ctcactttcttcctggtcatcaacccattggggaacttctggctaatcctcacagttacg
tccgtggagctgggtgtcttgggtttgatgaccctctggaacgttggcatggacagcatc
tcaatcctgtgccttatttataccctcaacttcgccatggatcactgtgcaccacacctg
tatacttttgtgctggccaccgagcacactaggacgcagtgcatcaagttggcactggag
gagcacggggccgcaatcctgcagaatacatcctgctttgtgattgggatcatgcccctg
gtgtttgtgccttccaatctgacctacacactgtttaagtgctccctcctcactgcgggc
tgcaccgtgctgcactgcttcgtcatcctccccgtcttcctaaccttcttcccgccgtcc
aaaaagagacacaagaaaaagaaacgggccaagcggaaagagcgggagagggaacgggaa
agggagagggaaagagaaagggaggagatagagtgcattgaagtcagggagaatcctgat
catgtgacaaatgtctga
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