Scomber japonicus (chub mackerel): 128377334
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Entry
128377334 CDS
T09718
Symbol
emilin1a
Name
(RefSeq) EMILIN-1a
KO
K24246
emilin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128377334 (emilin1a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
128377334 (emilin1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Baculo_PEP_C
DUF1664
ATG16
Apolipoprotein
Paralemmin
Filament
Spectrin
Laminin_II
NPV_P10
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
128377334
NCBI-ProteinID:
XP_053193246
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All DBs
Position
17:9872429..9896683
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AA seq
1030 aa
AA seq
DB search
MTFILPLSDTGRIKMETLFYLLAFMSAPVSWGLGYAESSVQTGQRAASRHRNWCAYVVTR
TVSCVMEDGVETYVKPDYQRCTWGQCPRVAYRTYRRPRYKVAYKMVTEMEWKCCHGYSGE
DCHNGPKGTTEQKGVETKEGDSDKVKQLEETINGLTKDLHNVQTTLHGINQRLPGLNGAI
VPADAAQPHMKETINSIQTRLDQLYNRTQVHDQTLLNINNHLVNGGGNELDGASKGGGSG
GNQLNTLKEEILTELERRVSLSCSSCQAGVEDLRRQQQEDRDRIRALEKLISSMDQHLRQ
SLEISRSETERSKACCNTVTELEKRMSDVEVRVTSTASKCEIIKSRLDKELAGTGGGKGR
VTEDRFNTRLRDLEKRVNNTVRKTEQRCTNTGNNMKDTVQRDVTQLRNMVVSRLDDHSYR
IGKIELEVAVLGDTVTDHSRRLSQLENITTFQDRRLTATTKMCNETCGPSGKGQKTEDTV
KTLEWRVVANQDEIQKFNTRLNDLSVSGDSLSDKIINLEDDVKKIIAVTGQDGERFNRIV
TEVENLGRDFEECSICRSVKDDLRLLTNTTMTGLGRCQTELTDLRRKVNSGETVCSQVCS
NLQEEVGRLREEVEKCTGQCKNNINDLKDRLDGHTIHSGRLGGDLKSIQGEIAGVMSTFN
SINNTLRGLGRTIQTHGNTLTDLTNTKDNIISEVDKLDKELTDHLGDSKIQFGNLNKEIQ
IIRSNYVTEVGECRRSSDGLDRRLSKLEGVCGRFDSVSESLERIKEGLNRHVSGLWSCVN
GLNITVMSHGDLIDNIQHVQLEKVHSNIHSLNSSVVDLVKEFHDFFEQDFMGPPGLPGPQ
GETGNRGPSGPVGPQGRVGPPGRDGRQGPVGPPGLRGEEGPAGSDAHVPRLSFSAALTRP
MRSAGTIVFNKIFVNENNAYNPQTGYFTAPVSGKYFFSGILTGHKNMKIEAVLSKSNTGV
ARVDSAGYQPEGLEKPMAEAKHIPGALAVFNIILPMEKGDTVCIDLVTGKLAFSSEPLTI
FSGMLLYENI
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgacatttattttgcctttaagcgacactggacgtataaagatggagacgttattttac
ctgcttgccttcatgtcggccccggttagttggggtctcggatatgcggagtccagtgtt
cagacgggacagagagccgcgagcagacacaggaactggtgtgcctatgtggtgacacgc
actgttagctgcgtgatggaggacggggtggagacctatgtcaaaccggactaccaacgc
tgcacctggggccagtgtcctcgagtggcctaccggacatataggaggccaaggtataag
gtggcgtacaaaatggtgacagagatggagtggaagtgttgccatggttactctggggaa
gactgccacaacgggccaaagggaaccactgaacagaagggagttgaaaccaaagagggt
gacagtgacaaggtcaaacagctggaggaaacaatcaatggtctgaccaaagacctccac
aacgtgcagaccacccttcacggcataaaccagaggctgccgggtctaaatggggccatt
gtcccagctgatgcagcccagccacacatgaaagaaactatcaacagcatccagaccaga
ctggatcaactctataacagaacacaggtccatgatcagaccctgctcaacatcaacaac
cacctggtgaacggagggggcaacgaactggatggagcctccaaaggaggaggaagtgga
gggaaccagcttaatactctgaaggaggagatactgacagagctggagagaagggtgtct
ctgtcctgctcttcctgccaggccggtgtggaggatctgaggcgccagcagcaggaggac
agggacaggatcagagccctggagaagctaatcagctccatggaccagcatctgaggcag
agtctggaaatatcccgcagtgagactgagcgctccaaggcatgctgcaacactgtcact
gaactggagaagaggatgtctgatgtggaggtcagggtcacctccactgccagcaagtgt
gaaatcatcaaaagtcgactggataaggagctagccgggacaggtggagggaagggaagg
gtgacagaggacaggtttaacaccagactgagagatctggagaagagggtgaataacacg
gtgaggaagacggagcagagatgtactaacacaggaaacaacatgaaggatacggttcag
agagacgtcacacagctgcgcaacatggtagtgagtcggttggatgaccacagctacagg
attggcaagatagagctggaagtggctgttcttggagacacagtgacagaccacagccga
cgtttaagccagctggagaacatcacaaccttccaggacagaaggctaacagcgaccaca
aaaatgtgcaatgaaacctgcgggcctagtggaaaaggccagaagactgaagacacagtg
aaaaccctagaatggagagttgtggccaatcaagacgagatccagaagtttaacactaga
ttaaatgatttgtctgtgtcaggtgactcgctctctgacaaaattatcaacttagaagat
gatgtcaaaaaaataattgctgtgacagggcaggatggcgaacgcttcaaccggattgtc
acagaggtagaaaatttgggccgtgattttgaggagtgctctatatgcaggagtgtaaaa
gatgatttgcgcttgctcaccaataccactatgactggcctcggcaggtgccagacagaa
ctaacagatctgcggagaaaggtcaactcgggagaaaccgtctgctctcaggtgtgctcc
aaccttcaggaggaggtgggacgacttagagaggaggtggagaagtgtacgggacagtgc
aaaaacaacataaatgatctgaaggatcgcctggacggtcacactatccacagtggtaga
ttaggaggggatctgaagtccatccaaggagagatagctggggtaatgtccacattcaac
tccattaataacactctgaggggcctgggaaggaccatacagacgcatgggaacacactg
accgatctgaccaacaccaaggacaacatcatctctgaggtggacaagctggataaggag
ctgacggatcaccttggtgactcaaagattcaatttggcaaccttaacaaagaaatccaa
ataataaggagcaactatgtgacagaagtaggggagtgccgacggtccagcgatggcctg
gaccgaagactctccaagctggagggggtgtgcggacgcttcgactctgtttcagagagc
ctggagaggatcaaggagggcctgaaccgacatgtgtctgggctgtggagctgcgttaat
ggactcaatatcacagtaatgtctcacggagatcttattgacaatatacagcatgtccag
ctggagaaagttcactccaacatacacagcctgaactcttcagtcgtggacttggtcaag
gagttccacgatttctttgaacaagacttcatgggtccacctggtctgccaggtccccaa
ggagagacaggcaatcgtggaccctcaggtcccgtaggaccccaagggagggtgggacct
ccaggcagagatggtcggcagggaccagttggacccccaggtctcagaggtgaagaaggt
cctgcagggtctgatgcccacgtaccacgcctttctttctctgctgctctgactcgcccg
atgagaagcgcaggaaccatcgtgttcaacaaaatcttcgtcaatgaaaataatgcctac
aacccccaaacaggttatttcacagctccagtcagtgggaagtacttcttcagcggcatt
ctgacaggccacaagaacatgaagatcgaggcagtgctgtccaagtccaacactggcgtg
gccagagtggactcagctgggtatcagcctgaaggcctggagaagccaatggctgaggcc
aaacacatacctggagctctggctgtcttcaacatcatcctgcccatggagaaaggggac
accgtctgtattgacctcgtcactggcaagctggcgttctcctctgaacccttgaccatc
tttagtgggatgttgttgtacgaaaacatctga
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