Scomber japonicus (chub mackerel): 128377448
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Entry
128377448 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128377448
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128377448
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
LRR_4
SPRY
AFG1_ATPase
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
128377448
NCBI-ProteinID:
XP_053193375
LinkDB
All DBs
Position
17:complement(789159..833850)
Genome browser
AA seq
1041 aa
AA seq
DB search
MDGGEFTGSGGTAEKCQRKLKSNLEKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAE
VNDEHEVRQIETASRKPDRPETSIRHEDIFKVPPGGDKPIRTVMTKGVAGIGKTVLTQKF
TLDWAEDKANQDIHFTFPFTFRELNVLKKKKYSLVELVHHFFTETKEAGICRFEEFQVVF
IFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIP
PECVGMVTEVRGFTDPQKEEYFSRRLIDEEQARTIISHIKTSRSLHIMCHIPVFCWITAT
VLQDVFKRRKRRELPKTLTEMYIHFLVVQSKLKNVKYDGGAETDPHWSSESRKMIESLGK
LAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVFSFVHLSVQE
FLAALHVHLTFIKSAVNLLAVEQTTSWSEVFKGKSTRFYQSAVDEALKSPNGHLDLFLRF
LLGLSLKTNQMLIRGLLTQTGSSSQTNQDAVEYIKKKISENVSAERSINLFHCLNELNDR
SLVEEIQQYLRSGSLSTDKLSPAQWSALVLILLSSGKDLDVFDLKKYSASEEALLRLLPV
FKASSKAVLSGCHLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHC
ELKTLRLNGCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCGL
ETLRLNGCNLSQRSCAALSSVLSSQSSSLRELDLSNNNMQDSGVKQLSAGLESPHCTLET
LSLSGCLITGAGCASLASALRSNPSHLRDLDLSNNNLQDSGVKQLSAGLESPHCTLEALR
VDHGGEHRLKPGLKKYFCELTLDTNTVNRNLKLSDNNRKVTHVEEDQSYPDHPDRFDRLA
QLLCSNGLTGRCYWEVERRGRVHISVSYRRISRKGESEDCLFGWNDQSWNLFCSDEKGYH
VWHNNEGTPISSSSSSSSSSSSVSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTE
PLYAGFGVNPDSSVSVCPLSE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggggagttcacaggaagtggaggaactgctgaaaagtgtcaacgtaaactc
aagtctaacctggagaagaagttccagtgtctgtttgaggggatcgctaaagcaggaaac
ccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgcagag
gtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagacca
gaaacatcaatcagacatgaagacatctttaaagtcccacctggaggagataaaccaatc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattcact
ttcagagagctgaatgtgctgaaaaagaaaaagtacagcttggtggaacttgttcatcac
ttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttc
atctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctg
actgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaa
ctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgagtgtgtcggcatggtgacagaggtcagagggttcactgacccacagaaggaggag
tacttcagcaggagattgatagatgaggagcaggccagaaccatcatctcccacatcaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctgcaggatgtgtttaaaagaagaaagagaagagagctgcccaagaccctgactgag
atgtacatccacttcctggtggttcagtccaaactgaagaacgtcaagtatgatggagga
gctgagacagatccacactggagttcagagagcaggaagatgattgagtctctgggaaaa
ctggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcagagcagcgtcagtgtactcaggagtgttcacacaggtctttaaa
gaggagagagggctgtaccaggacaaggtgttctccttcgtccatctgagtgttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctgcagtcaatctgctggca
gtagaacaaacaacatcctggtctgaagtgttcaaaggcaaatcaacacgtttctaccag
agtgctgtggacgaggccttaaagagtccaaatggacacctggacttgttcctccgcttc
ctcctcggtctttcactgaagaccaatcagatgctcatacgaggtctgctgacacagaca
ggaagtagctcacagaccaatcaggacgcagtcgagtacatcaagaagaagatcagtgag
aatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactaaatgatcgt
tctctagtggaggagatccaacagtacctgagatcaggaagtctctccacagataaattg
tctcctgctcagtggtcagctctggtcctcatcttactgtcatcaggaaaagatctggac
gtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgcctgtg
ttcaaagcttcaagtaaagctgtgctgagtggctgtcacctctcagagagaagctgtgca
gctctgtcctcagttctcagctcccagtcctctagtctgagagatttggacctgagtaac
aacaacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgt
gaactgaagactctcaggctgaatggctgtaacctctcagagagaagctgtgcagctctg
tcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaac
ctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgtgggctg
gaaactctcagactgaatggctgtaacctctcacagagaagctgtgcagctctgtcctca
gttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacatgcaa
gattcaggagtgaagcagctttctgctggactggaaagtccacactgcacactggaaact
ctcagtctgtcaggatgtctgatcacaggggcaggctgtgcttctctggcctcagctctg
aggtccaacccctcccatctgagagatctggacctgagtaacaacaacctgcaggattca
ggagtgaagcagctttctgctggactggagagtccacactgtacactggaagctctcagg
gtggaccatggtggagagcacaggttaaaacctggtctgaagaagtatttctgtgaactc
acactggacacaaacacagtgaacagaaacctcaaactgtctgataacaacaggaaggtg
acacatgtggaggaggatcagtcatatcctgatcatccagacagatttgaccgcttggct
cagctgctgtgtagtaatggtctgactggtcgctgttactgggaggtcgagaggagagga
agggttcatatatcagtgagttacagaagaatcagcaggaaaggagagagtgaagactgt
ttatttggatggaacgatcagtcctggaatctgttctgctctgatgaaaaaggttaccat
gtctggcacaataacgaaggaacacccatctcctcttcctcctcctcctcctcctcctcc
tcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcactctgtccttc
tacagagtctcctctgacacactgatccacctccacaccttcaacaccacattcactgaa
cctctgtatgctgggtttggggtcaaccctgattcctcagtgtctgtgtgtcctctgtct
gagtga
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