Scomber japonicus (chub mackerel): 128377463
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Entry
128377463 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128377463
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128377463
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
WHD_NOD2
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
128377463
NCBI-ProteinID:
XP_053193389
LinkDB
All DBs
Position
17:2924531..2954509
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AA seq
1079 aa
AA seq
DB search
MDQSEDREEGVPPSKSSLCGEHDSQTKSEVLTGQSVQQHQTQLDSIFMLLEENISKFVKN
ELKKMQKALSPDDPECLESQSEDEEVEAFLKITVHFLRRMKQEELAERLQRSRAAKCRRE
LKSNLQKKFQCVFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNGEHEVRQIETASRKPDK
PDTTIRHEDIFKASPGRDKPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANEDFTFPFTF
RELNVLKKKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILT
DVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEY
FRKRFRDGEQASTIISHIKTSQSLHIMCHIPVFCWITATVLEDVLKSRVGGELPKTLTEM
YIHFLVAQSKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFKQLQKGNLIFYESDLTEC
GIDIREASVCSGVFTQVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLEE
QQPTSRWFKVFKEKPEPTRFYQSAVDEALKSPNGHLDLFLRFLLGLSLQTNQSLLRGLLT
QTGGSSQTNQETVKYIKKKISENVSAERSINLFHCLNELNDRSLVEEIQQYLRSGSLYKK
KLSPAQWSALVFVILSSGKDLDVFDLKKYSASEEALLRLLPVVKASNKALMSGCELSERS
CAALSSVLSSKSSSLRDLDLSNNNLQDSGVKQLSTGLESPHCTLETLRLSGCNLSERSCA
ALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCGLETLSLSGCLITEEGCSSL
VSALSSNPSHLRELDLSYNHPGDSGEKLLSARLEDPHWRLDTLRVDHGGEHRLKPGVEKY
FCELTLDTNTVNYYLKLSDNNRKVTRVKEKQSYPDHPDRFDCWPQLLCSNGLTGRCYWEV
EWRGDVEISVSYRRISRKGYTDDCILGFNLQSCSLICSDGSYSVYHNKRETSSSSPSSSV
SDRVAVYVDCPAGTLSFYRVSSDTLIHLHTFYTTFTEPLYPGFRFGSSGASLSLCPLSE
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgatagccagaccaaatcagaggttctcactggtcagtctgtccagcagcatcaa
acacagctggactccatatttatgctgctggaggagaacatcagcaagtttgtgaagaac
gagctgaagaagatgcagaaggctctgagtccagatgacccagaatgcttagagagtcag
agtgaggatgaggaggtagaggcatttctgaagatcacagtgcacttcctgaggagaatg
aagcaggaggagctggctgagcgtctgcagagaagtcgtgctgcaaagtgtcgacgtgaa
ctgaagtctaacctgcagaagaagttccagtgtgtgtttgaggggatcgctaaagcagga
aacccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgca
gaggtcaatggtgaacatgaggtcagacagattgaaacagcatccaggaaaccagacaaa
ccagacacaacaatcagacatgaagacatctttaaagcctcacctggaagagataaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaag
ttcactctggactgggctgaagacaaagccaacgaggacttcacatttccattcactttc
agagagctgaatgtgctgaaaaagaaaaagtacagcttggtggaacttgttcatcacttc
tttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatc
tttgacggtctggatgagtgtcgacttcctctggacttccacaacaccgagatcctgact
gatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaactg
cttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcct
gagtgtgtcggcatggtgacagaggtcagagggttcactgacccacagaaggaggagtac
ttcaggaagagattcagagacggggagcaggccagcaccatcatctcccatatcaagaca
tcacaaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagtt
ctggaggatgtgttgaaaagcagagtaggaggagagctgcccaagaccctgactgagatg
tacatccacttcctggtggctcagtccaaagtgaagaaggtcaagtatgatggaggagct
gagacagatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactg
gcttttaagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgt
ggcatcgatatcagagaagcctcagtgtgctcaggagtgttcacacaggtctttaaagag
gagagaggcctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagttt
ctggctgctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggaagaa
caacaaccaacatccaggtggtttaaagtcttcaaagaaaaacctgaaccaacccgtttc
taccagagtgctgtggacgaggccttaaagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggtctttcactgcagaccaatcagtctctcctacgaggtctgctgaca
cagacaggaggtagctcacagaccaatcaggaaacagtcaagtacatcaagaagaagatc
agtgagaatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaat
gatcgttctctagtggaggagatccaacagtacctgagatcaggaagtctctacaagaag
aaattgtctcctgctcagtggtcagctctggtcttcgtcatactgtcatcaggaaaagat
ctggacgtgtttgacctgaagaaatactctgcttcagaggaggcccttctgaggctgctg
ccagtggtcaaagcttcaaataaagcactgatgagtggctgtgaactctcagagagaagc
tgtgcagctctgtcctcagttctcagctccaagtcctctagtctgagagatctggacctg
agtaacaacaacctgcaggattcaggagtgaagcagctctctactggattagagagtcca
cactgtacactggaaactctcaggctgagtggctgtaacctctccgagagaagctgtgca
gctctgtcctcagttctcagttcccagtcctctagtctgagagatctggacctgagtaac
aacaacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgt
ggacttgaaactctcagtctgtcaggatgtctgatcacagaggaaggctgttcttctctg
gtctcagctctgagctctaacccctcccatctgagagagctggacctgagctacaatcat
ccaggagactcaggagagaagcttttgtctgctagactggaggatccacactggagactg
gacactctcagggtggaccatggtggagagcacaggttaaaacctggtgtggagaagtat
ttctgtgaactcacactggacacaaacacagtaaactattacctcaaactgtctgataac
aacaggaaggtgacacgtgtgaaggagaagcagtcatatcctgatcatccagacagattt
gactgctggcctcagctgctgtgtagtaatggtctgactggtcgctgttactgggaggtc
gagtggagaggagacgttgaaatatcagtgagttacagaagaatcagcaggaaaggatac
actgatgactgcatattaggatttaatcttcagtcatgcagtctgatctgttctgatggt
agttactctgtctatcacaataagagagaaacatcctcctcctccccctcctcctctgtc
tctgacagagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtc
tcctctgacacactgatccacctccacaccttctacaccacattcactgaacctctgtat
cctgggtttaggtttgggtcatctggtgcttcattgtctctgtgtcctctgtctgagtga
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