Scomber japonicus (chub mackerel): 128377470
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Entry
128377470 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128377470
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128377470
BRITE hierarchy
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
128377470
NCBI-ProteinID:
XP_053193397
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All DBs
Position
17:3121942..3349936
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AA seq
1275 aa
AA seq
DB search
QQRPDSPEPSCVSMKSDRSMRQPIYFKHGHQSADQSLIHQQRPDSPELSCVSMKSDWSKG
RLIDFKHGHQSADQRVHQQSSEVLSGQSVQQHQTQLDSIFMLLEENISRFVKNELKKMQK
ALSPDDPECLESQSEDEEVLDGEEEEQRRSSREAFLKITLHFLRRMKQEELAERLQSRTP
AAKCQCKLKSNLEKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEVRQIET
ASRKPDRPETTIRQEDIFKASSGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQD
IHFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPL
DFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRG
FTDPQKEEYFRKRFRDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREGG
ELPKTLTEMYIHFLVAQSKVKKVKYDGGAQTDPHWSPESRKMIESLGKLAFEQLQKGNLI
FYESDLTECGIDIRAALVYSGMFTQVFKEERGMYQDKVFCFVHLSVQEFLAALHVHLTFI
KSGVNLLEEEQTTSCLTIFKEKPEPTQFYQRAVNEALKSPNGHLDLFLRFLLGLSLQTNQ
TLLRGLLTQTGSSSQSNQETVEYIKKKISENLSAERSINLFHCLNELNDRSLVEEIQRSL
RSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASHKALLS
GCKLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCTLETLSLSGC
LITEEGCASLASALTYNPSHLRELDLNLDVFDLKKYSASEEALLRLLPVVKASNTAMLTE
CNLSERSCAALSSVLSSQSSSLRDLNLSNNNLQDSGVKQLSAGLESPHCTLETLRLTGCN
LSERSCAALSSALSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCTLETLSLSGCLIT
EEGCASLASALSSNPSHLRELDMSYNHPGDSGEKLLAAGLEDPHWRLNTLRVDHGGEQWL
KPGLKKYFCELTLDTNTVNRRLKLSDNNRKVILVKEDQSYPDHPDRFDFWSQLLCSNGLT
GRCYWEVEWRGEVRISVSYRRISRKGHSDDCLFGGNDQSWSLFCSDDDGYSVRHNKIETP
ISSSSPSPSASSSSSVSNRVAVYVDCPAGTLSFYRVSSETLIHVHTFNTTFTEPLYAGFG
FWTHGASVSLYPLSE
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
cagcagagaccagattcccctgaacccagctgtgtgtccatgaagagtgaccggtctatg
cgccaacctatttacttcaaacatggacatcagtctgctgaccagagtctgatccatcag
cagagaccagattctcctgaactcagctgtgtgtccatgaagagtgactggtctaagggt
cgacttattgacttcaaacatggacatcagtcagctgatcagagagttcatcagcagagc
tcagaggttctcagtggtcagtctgtccagcagcatcaaacacagctggactccatattt
atgctgctggaggagaacatcagcaggtttgtgaagaacgagctgaagaagatgcagaag
gctctgagtccagatgacccagaatgcttagagagtcagagtgaggatgaggaggtgttg
gacggtgaggaggaagagcagaggaggagcagcagagaggcatttctgaagatcacactg
catttcctgaggagaatgaagcaggaggagctggctgagcgtctgcagagcagaactcct
gctgcaaagtgtcaatgtaaactcaagtctaacctggagaagaagttccagtgtctgttt
gaggggatcgctaaagcaggaaacccaacccttctgaatcagatctacacaccactctac
atcacagagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaaca
gcatccaggaaaccagacagaccagaaacaacaatcagacaagaagacatctttaaagcc
tcatctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcattggg
aaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggac
atacacttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaagtac
agcttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcagg
tttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctg
gacttccacaacaatgagatcctgactgatgttacagagtccacctcagtggatgtgctg
ctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacga
cctgcagcagccaatcagatccctcctgagtgtgtcggcatggtgacagaggtcagaggg
ttcactgacccacagaaggaggagtacttcaggaagagattcagagatgaggagcaggcc
agcaccatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatccca
gtgttctgctggatcactgctacagttttggaggatgtgttgaaaagcagagagggagga
gagctgcccaagaccctgactgagatgtacatccacttcctggtggctcagtccaaagtg
aaaaaggtcaagtatgatggaggagctcagacagatccacactggagtccagagagcagg
aagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatc
ttctatgaatcagacctgacagagtgtggcatcgatatcagagcagccttggtgtactca
ggaatgttcacacaggtctttaaagaggagagagggatgtaccaggacaaggtgttctgc
ttcgtccacctgagtgttcaggagtttctggctgctcttcatgtccatctcacattcatc
aagtctggagtcaatctgctggaagaagaacaaactacatcctgcctaacaatctttaaa
gaaaaacctgaaccaacccaattctaccagagagctgtgaacgaggccttaaagagtcca
aatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcag
actctcctacgagggctgctgacacagacaggaagtagctcacagtccaatcaggaaaca
gtcgagtacatcaagaagaagatcagtgagaatctgtctgcagagagaagcatcaatctg
ttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacggtccctg
agatcaggaagtctctccacagataaactgtctcctgctcagtggtcagctctggtcttc
atcttactgtcatcagaaaaagatctggacgtgtttgatctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcttcacataaagctctgctgagt
ggctgtaaactctccgagagaagctgtgcagctctgtcctcagttctcagctcccagtcc
tctagtctgagagatttggacctgagtaacaacaacctgcaggattcaggagtgaagcag
ctttctgctggactggagagtccacactgtacactggaaaccctcagtctgtcaggatgt
ctgatcacagaggaaggctgtgcttctctggcctcagctctgacctacaacccctcccat
ctgagagagctggacctgaatctggatgtgtttgacctgaagaaatactctgcttcagag
gaggctcttctgaggctgctaccagtggtcaaagcttcaaatacagctatgctgactgaa
tgtaacctctcagagagaagctgtgcagctctgtcctcagttctcagctcccagtcctct
agtctgagagatctgaacctgagtaacaacaacctgcaggattcaggagtgaagcagctt
tctgctggactggagagtccacactgtacactggaaactctcaggcttaccggctgtaac
ctctcggagagaagctgtgcagctctgtcctcagctctcagctcccagtcctctagtctg
agagatctggacctgagtaacaacaacctgcaggattcaggagtaaagcaactttctgct
ggactggagagtccacactgtacactggaaactctcagtctgtcaggatgtctgatcaca
gaggaaggctgtgcttctctggcctcagctctgagctccaacccctcccatctgagagag
ctggacatgagctacaatcatccaggagactcaggagagaaactgctggctgccggacta
gaggatccacactggagactgaacactctcagggtggaccatggtggagagcagtggtta
aaacctggtctgaagaagtatttctgtgaactcacactggacacaaacacagtgaacaga
agactcaaactgtctgataacaacaggaaggtgatattggtgaaggaggatcagtcatat
cctgatcatccagacagatttgacttctggtctcagctgctgtgtagtaatggtctgact
ggtcgctgttactgggaggtcgagtggagaggagaggttcgtatatcagtgagttacaga
agaatcagcaggaaaggacacagtgatgactgtttgtttggagggaacgatcagtcctgg
agtctgttctgctctgatgatgatggttactctgtccgtcacaataagatagaaacaccc
atctcctcctcctcaccctccccctccgcctcctcctcctcctctgtctctaacagagta
gcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctcagagaca
ctgatccacgtccacaccttcaacaccacattcactgaacctctgtatgctgggtttggg
ttctggactcatggtgcctcagtgtctctgtatcctctgtctgagtga
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integrated database retrieval system
