Scomber japonicus (chub mackerel): 128377492
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Entry
128377492 CDS
T09718
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128377492
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128377492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
LRR_1
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
128377492
NCBI-ProteinID:
XP_053193418
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All DBs
Position
17:complement(4397457..4404734)
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AA seq
1033 aa
AA seq
DB search
MEQEELADHLQSRTRAGRCQRKLKSNLQKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGG
TAEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPERDEPIRTVMTKGVAGIGKTVLT
QKFTLDWAEDKADQDIYFTFPFTFRELNVLKEKKYSLVELVHHFFTETKETGICRFEEFQ
VVFIFDGLDECRLTLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAAN
QIPPEYVGMVTEVRGFTDPQKEEYFRKRFRDEKQASTIISHIKTSRSLHIMCHIPVFCWI
TATVLEDVLKSREGGELPKTLTEMYIHFLVLQSKLKNIKYDGRAQTDPHWNKNSRKMIES
LGKLAFEQLQKGNLIFYESDLTECGIDIREASVYSGLFTQVFKEERGLYQDKVFCFVHLS
VQEFLAALHVHLTFIKSGVNLLAGEQTTSWSDVFRGKSTGFYQSAIDEALKSPNGHLDLF
LHFLLGLSLQTNQTLLRGLLTQTGSSSQTNQKTIKYIKKKISENLSAERSINLFHCLNEL
NDCSLVQEIQQYLRSGSLSTDNLSPAQWSALVFILLSSEKDLDVFDLKKYSATEEALLRL
LPVVKTSSKALLSGCNLSERSCAALSSVVSSQSSSLRELDLSNNNLQDSGLKQLSSGLES
PHCTLESLSLSGCLITEEGCAPLASALSYNPSHLRELNLSNNNLQDSGMMQLSAGLESPH
CTLESLSLSGCQITEKGCAPLASALSSQSSSLRALDLSDNDLQDSGVTLLSAGLESPHCT
LERLSLSGCQITEEGCASLASALSCNPSHLRALDLSYNHPGDSGEKLLAAGLEDPHWRLD
ILRMDHGGEHRLKPGLKKYFCELTLDTNTVHEDLKLFDNNRKVTCVKKDQSYPDHPDRFD
HWPQLLCRNVLTGRCYWEVEWRGWVDISVSYRGIRRKGNSDDCLFGLNDQSWSLICSDDG
YSVHHNKRETSISSSVSNRVGVYVNCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLYAGFG
FWQFGSSVSVCPL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaggagctggctgaccatctgcagagcagaactcgtgctggcaggtgtcaa
cgtaaactcaagtctaacctgcagaagaagttccagtgtctgtttgaggggatcgctaaa
gcaggaaacccaacccttctgaatcagatctatacaccgctctacatcacagagggaggg
actgcagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaacca
gacagaccagaaacaacaatcagacaagaagacatctttaaagcctcacctgaaagagat
gaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaaca
caaaagttcactctggactgggctgaagacaaagccgaccaggacatatacttcacattt
ccattcactttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaactt
gttcatcacttctttactgaaaccaaagaaacaggaatctgcaggtttgaagagttccag
gttgtgttcatctttgacggtctggatgagtgtcgacttactctggacttccacaacaat
gagatcctgactgatgttacagagtctacctcagtggatgtgctgctgacaaacctcatc
agggggaagctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaat
cagatccctcctgagtatgttggcatggtgacagaggtcagagggttcaccgacccacag
aaggaggaatacttcaggaagagattcagagatgagaagcaggccagcaccatcatctcc
cacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatc
actgctacagttctggaagatgtgttgaaaagcagagagggaggagagttgcccaagacc
ctgactgagatgtacatccacttcctagtgcttcagtccaaactgaagaacatcaagtat
gatggaagagctcagacagatccacactggaataaaaatagcaggaagatgattgagtcc
ctgggaaaactggcatttgagcagctgcagaaaggcaacctgatcttctatgaatcagac
ctgacagagtgtggcatcgatatcagagaagcctcagtgtactcaggattgttcacacag
gtctttaaagaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagt
gttcaggagtttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaat
ctgctggcaggagaacaaacaacatcctggtctgatgtgtttagaggcaaatcaacaggt
ttctaccagagtgctatcgatgaggccttaaagagtccaaatggacacctggacttgttc
ctccacttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgctg
acacagacaggaagtagctcacagaccaatcagaaaacaatcaagtatatcaagaagaag
atcagtgagaatctgtctgcagagagaagcatcaatctattccactgtctgaatgaattg
aatgattgttctctagtgcaggagatccaacagtatctgagatcaggaagtctctccaca
gataacctgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaa
gatctggacgtgtttgacctgaagaaatactctgctacagaagaggcacttctgaggctg
ctgccagtggtcaaaacttcaagtaaagctctgcttagtggctgtaacctctcagagaga
agctgtgcagctctgtcttctgttgtcagctcccagtcctctagtctgagagagctggac
ctgagtaacaacaacctgcaggattcagggttgaagcagttgtcttctggactggagagt
ccacactgtacactggaaagtctcagtctgtcaggatgtctgatcacagaggaaggttgt
gctcctctggcctcagctctgagctacaacccctcccatctgagagagctgaacctgagt
aacaacaacctgcaggattcaggaatgatgcagttgtctgctggactggagagtccacac
tgtacactggaaagcctcagtctgtcaggatgtcagatcacagagaaaggctgtgctcct
ctggcatcagctctgagctcccagtcctctagtctgagagcgctggacctgagtgacaac
gacctgcaggattcaggggtgacgctgctgtctgctggattggagagtccacattgtaca
ctggaaagactcagtctgtcaggatgtcagatcacagaggaaggctgtgcttctctggcc
tcagctctgagctgcaacccctcccatctgagagcgctggacctgagctacaatcatcca
ggagactcaggagagaagctgttggctgctggactggaggatccacactggagactggac
atactcaggatggaccatggtggagagcacaggttaaaacctggtctgaagaagtatttc
tgtgaactcacactggacacaaacacagtacatgaagacctcaaactctttgacaacaac
aggaaggtaacatgtgtgaagaaggatcagtcatatcctgatcatccagacagatttgat
cactggcctcagctgctgtgtagaaatgttctgactggtcgctgttactgggaggtcgag
tggagaggatgggttgatatatcagtgagttacagaggaatcagaaggaaaggaaacagt
gatgactgtttgtttggacttaatgatcagtcctggagtctgatctgctctgatgatggt
tactctgtccatcacaataagagagaaacatccatctcctcctctgtctccaacagagta
ggagtgtatgtgaactgtcctgctggcactctgtccttctacagagtctcctctgacaca
ctgatccacctccacaccttcaacaccacattcactgaacctctgtatgctggatttggg
ttctggcagtttggttcctcagtatctgtgtgtcctctgtga
DBGET
integrated database retrieval system
