Scomber japonicus (chub mackerel): 128377508
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Entry
128377508 CDS
T09718
Symbol
pax1b
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128377508 (pax1b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128377508 (pax1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_SB
HTH_29
Motif
Other DBs
NCBI-GeneID:
128377508
NCBI-ProteinID:
XP_053193436
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Position
17:complement(6660935..6673276)
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AA seq
452 aa
AA seq
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MPVVPSQSVHPDRQGQGERFGCWAQSTSCSLSDCNKGVYVGDWLQVFRDVQERSFFWLLN
DDYFANRKHDIHPQEEEEEEEEEEKEEVQGSPGCSQSIVGCVGWWSSETLRRCGQQLMEQ
SYGEVNQLGGVFVNGRPLPAPLRLRIVELAQLGMRPCDISRQLRVSHGCVSKILARYNET
GSIMPGAIGGSKPRVTTPAVVRSIQEYKQGDPGIFAWEIRDRLLTDGVCDKYNVPSVSSI
SRILRNKIGNVSQHESSKPTPAQMPPYGHVYPYSPTGSRTGAGPPGHVGLPRSWHNILGI
RAFMDPAALSGSDGHSTKVEDWTSMTSMSSRPLPSGVNGADKTNNEPDLKYPQQSSSSLS
GYVPACAYSPPNQYGVYGGPAANYMIPGHHWQPQSSNLNPSLTPSLVHPGPAASLEAADF
HHATSFKLSQREGRADGHTEPDCILLHKSHTL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgtgccgtcccaaagcgttcaccctgaccgtcagggtcagggtgaacgcttt
ggttgttgggctcagagcacctcctgctctctcagtgactgcaataagggtgtgtatgtg
ggtgattggctgcaggtgttccgagacgttcaggagcgctcgttcttctggttgctgaat
gacgactactttgcaaacaggaaacatgacatccacccacaggaggaggaggaggaggag
gaggaggaggagaaggaggaggttcagggaagtccaggctgcagtcaaagcattgttgga
tgtgttggatggtggagcagtgagacgctgaggcgctgtggacagcagctgatggagcag
agctacggggaggtgaaccagctcggcggggtgtttgtgaacggccggccgctgcccgcc
ccgctgcggctccgcatcgtggagctggctcagctcggcatgaggccctgcgacatcagc
cgccagctgcgcgtgtctcacggctgcgtgtccaagatcctcgcgcgctacaacgagacg
ggctctatcatgcccggtgcgatcggtggcagcaagcctcgggtcaccacccccgccgtg
gtccgcagcatccaggagtacaagcaaggagacccggggattttcgcctgggagatccga
gacaggctgctgacagacggggtgtgtgataagtacaacgtgccgtcagtgagctccatc
agccggatcctcaggaataagattgggaatgtttctcaacatgagagcagcaaaccgact
ccggctcagatgcccccatacggacacgtgtacccctactcacccaccgggagcaggacc
ggagcaggaccccctgggcacgtcgggctgccccggagctggcacaacatcctgggcatc
cgagccttcatggacccggcagctctgtctggatctgatggtcactcaaccaaagtggag
gactggaccagtatgaccagtatgagcagcagaccgttaccttctggagtcaatggagcc
gacaaaaccaacaacgagccagacctcaaatacccacaacagtcttcatccagcctgtct
ggttacgtcccagcttgtgcgtactctccaccgaaccagtacggtgtgtacggaggcccg
gcggccaactacatgatccctggacaccactggcagcctcagtcatccaatctgaatccc
agtttgactcccagtctggttcatcctggccccgctgcatcgctggaggctgcagatttc
caccatgctacatcttttaaactttcacagagagaaggcagagcagacggtcacactgag
cctgattgcatcctgctacacaagagccacacactctga
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