Scomber japonicus (chub mackerel): 128377528
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Entry
128377528 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128377528
04121 Ubiquitin system [BR:
sjo04121
]
128377528
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128377528
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128377528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Lipoprotein_3
Motif
Other DBs
NCBI-GeneID:
128377528
NCBI-ProteinID:
XP_053193456
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Position
17:complement(9013004..9015537)
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AA seq
504 aa
AA seq
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MYIAKDMVPIYTVEKPGFINMIKVLDPRYVLPSRKFFSDVALPNLYNSTRQRVAKELQEE
VSFYSATTDLWSSRTMQPYMSLTVHFVNNDWTLRSVCLQTAYFPEDHTGEIVAQGLRDAL
NSWNLAEDRLICMTTDSGSNMIKALKDNAWPNLQCFGHRLHNAIENGVKEDPRINRAIGV
CKKAVSAFSYSWKRRKDMSEVQAELGLPTHQLITESPTRWGSRQRMIERFLEQEKALVRV
LGSDKRSRHLVPTWQDLDVLESINKAVKPLQEFTDALSGESYVSVSYIKPVLHLFKTSLL
EPGEEDTELTKTIKGNIMRYLDDKYSDPVKDELLDMASLVDPRFRTTYIDPDKVEEVKKR
VVAELMALPAPANNSTPQQPGTAVQVRQEDAQPPPKKKMTLAAFFKQNAVSSPNQSEAEK
IETELKSYLLTPEVDPDTNPLEWWKRHQPNFPRLSVLAKRYLSIPATSAPSERVFSVGGG
IVTCHRACLKPEVVDRLVFLAKNV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtatatagcaaaggatatggtgccaatatatacggtggaaaagccggggttcattaac
atgatcaaagttttggaccccaggtatgtgctacctagccgaaagttcttctccgacgtt
gccttgcccaatttatacaatagcacaagacaacgggtcgcaaaagagttacaagaagaa
gtgtccttttactccgccaccaccgatttgtggtcaagtcggacgatgcaaccctatatg
agtctcacagtgcactttgtcaacaacgactggactctgcggagcgtctgccttcaaaca
gcatacttcccagaggatcacacgggtgaaattgtagcccaggggctaagagatgccctc
aactcatggaaccttgccgaagaccgactcatttgtatgactactgacagcggcagcaac
atgattaaagctctgaaggacaatgcgtggcctaacctgcagtgctttggacacagattg
cacaatgctatcgagaatggtgtgaaggaggacccacggatcaatcgtgctattggggta
tgtaaaaaggctgtgtctgccttttcttacagctggaaaagaagaaaagacatgagcgaa
gtacaggcagagcttggtctacccactcatcagctgataaccgagtccccgaccagatgg
ggttcacgccaaagaatgatagagagatttctcgaacaggagaaggctctagtccgtgtc
ctgggttcggacaagagaagtcgccatcttgtgcccacttggcaagatttggatgtgttg
gagtcgataaataaagctgtgaaaccactccaagaattcactgatgcactctctggggag
tcctatgtcagtgtttcatacattaaaccagtgctccatcttttcaaaaccagtctccta
gagccaggggaggaagacacagagctcaccaaaacaataaaagggaacataatgcggtac
cttgacgacaaatacagtgaccctgtaaaagatgagctcttggacatggcctcactggtt
gacccaagattccgcacaacctacattgacccagacaaggtggaagaagtcaaaaaaaga
gttgttgctgagctgatggctctacctgctcctgccaacaacagtacaccacagcagcct
ggcacagctgtgcaggtgcgccaagaagatgcacagcctccacccaagaaaaagatgact
ttagcggccttcttcaaacagaatgcagtgtcatctcccaaccagtcagaggcagaaaag
atagagactgagctgaaatcttacctattgacccctgaagtggacccagacaccaatcct
cttgagtggtggaagcgccaccaaccaaattttcctaggctaagtgtcctggcaaaaaga
tacctctcaatcccagcaacaagtgcaccctcagagagggttttcagtgtgggggggggc
attgttacatgccaccgggcatgtctaaagccagaggtggtagataggcttgtcttcctg
gctaagaatgtttag
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