Scomber japonicus (chub mackerel): 128377537
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Entry
128377537 CDS
T09718
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128377537 (med23)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
128377537 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
128377537
NCBI-ProteinID:
XP_053193465
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Position
17:15049581..15066954
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AA seq
1408 aa
AA seq
DB search
MKTLAPFVAADMALSMETQLQSIFEDVVKTEMIEEAFAGMFMDTPEDERTKLISCLGAFR
QYWGTLPQESHEQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETSLLPPRMVCVALISSD
NLEWERTQLWALTFKLIRKIIGGVDYKGVRDLLKAVLDKIQTIPTTVSSAIVQQLLAARE
VVEYILDRNACLLPAYFAITEIRKLYPEGQLSHWLLGSLISDFVDSFRPTARINSICGRC
SLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPFDKDLFEPQTGLLRYVLEQPYSREMVCN
MLGLNKQHKQRCPVLEEQLVDLVVYAMERSETEEHFDADIGGTSQLLWQHLSSQLIFFVL
FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLY
PEKECIPVPDINKPQSTHSFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLR
NKTLGMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRINLPGTNCMASGSVTPL
PMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKG
FISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHL
CVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARATHVTDFFTG
SDSIHGTWCKDILQTIMAFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEE
YRKWKSMANENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAHV
RTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCY
FIIQLLLLKPNDFRNRVNDFVKENAPEHWLQSDWHNKHMSYHKKYPEKLYFEGLADQVNP
PMQLQHQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT
YLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKFGMNPREDNVWIP
DDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVG
NALLNVVLKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVSVISSPALTSETEW
AGYPFALLDFTACHQSYSEMNCSYVLALAHAVWHHSSIGQLSLIPKFLSETLKPIVQTEF
QLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHCQHLSYMDPICDFLYHIKY
MYTGDSVKEQVEKIIMTLRPAMKLRLRFITHSSKVETSSSAAAAAAAAASASAAASSNTP
QPSSSSSSLSSSAAAASPSSTQHTHTPM
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattggcaccttttgttgctgcagacatggcgctttcgatggagacgcagctc
caaagcatctttgaggatgttgtgaaaactgagatgatagaagaggcctttgctgggatg
tttatggacactcccgaggatgagaggacaaaactgatcagttgtcttggagcctttaga
caatattgggggacactaccacaggagtcccatgaacagtgtgtgcagtggatcgtgcgg
ttcatacacagccagcacagtcccaaaagaatctcctttctgtacgactgtcttgcaatg
gctgtggagaccagtctgttgccgcccaggatggtgtgtgttgctctgattagctcagac
aatttggagtgggagaggactcagttgtgggccttaactttcaaactgattcggaagatc
atcggaggggtggactacaagggtgttcgagacctgttgaaagccgtactggataaaatt
cagaccattcctaccactgtcagctcagctatagttcaacagctgctggctgccagagag
gtagtagaatatatcctggacagaaatgcctgcctgctgccagcttattttgccatcaca
gaaatcagaaaactatatccagaaggacaactgtcacactggcttttgggcagtttgata
tcagactttgtggacagctttagacccacagccagaatcaactccatctgtggccggtgc
agccttttaccagttgtgaataacagcggggccatctgtaactcatggaaattagaccct
actaccctccgcttccctctgagaggcatgctgccatttgacaaggacctgtttgagcca
cagacgggtttgctgcgctatgtgttagaacagccgtactcgagagagatggtctgcaac
atgttaggactcaacaagcagcataaacagcgctgccccgtgctagaggagcagctggtg
gacctggtggtgtatgccatggagcgctctgagactgaggaacactttgatgcagacatt
ggaggaactagccagttgctgtggcagcacctctcctcccagctcatcttctttgtgttg
tttcagtttgcaagcttcccacacatggtgctgtcgttgcatcaaaagctcgcaggtaga
ggtcttattaaagggagagaccacttgatgtgggtcctgctgcagttcatctcagggagc
attcagaagaacgccttagccgacttcctgcctgtcatgaagctctttgacctgctgtac
ccagaaaaagagtgcattccagttcctgacattaacaagccccagtccactcattccttt
gccatgacatgcatttggatccacctgaaccgcaaagctcagaacgacaactctaaacta
caaatacccataccgcactctctgaaactacaccacgagtttctccagcagtcgttgcgc
aacaagaccctgggcatgtctgactataagatcgccctgctgtgtaatgcctacagcacc
aactctgagtgcttcacactgccgatgggcgtcctggtagagaccatctacggaaacgga
tctatgaggatcaacctgcctggcaccaactgtatggcatcaggatctgtgaccccgctg
cctatgaacctgcttgattctctcactgtacatgcgaaaatgagtttgatccacagcatc
gccacgcgggtgataaagctggcacatgctaaatccagcatcgccctggcccctgcgctg
gtcgaaacatacagcagactgttggtctatatggagatcgagtccttgggcatcaaagga
ttcatcagccagttgttgcccaacgtgtttaagtctcacgcttggggaatccttcacact
ttactggagatgttcagctacaggatgcatcacatccagccgcactacagagtccagctc
ctgagtcatctgcacagtctagctgcagtgccccagaccaaccagaaccagctgcatctg
tgtgtcgagagcacagctttgcgactgatcacagcgttgggtagttcggaggtgcagcct
cagttcacccgcttcctcaacgacccaaagacagttctgtcagccgagtctgaagagctg
aaccgagccctgatcctcaccctggccagagccacacatgtcaccgatttcttcacaggg
tctgactccatccacggaacttggtgtaaagacattctccagaccatcatggctttcaca
cctcataactgggcttcacacactctgtcctgcttccctgcaccacttcaggcgttcttc
aaacagaacaatgttcctcaggagtcccgtttcaacctgaagaagaacgtggaagaagag
tacaggaagtggaagtccatggccaatgagaacgacatcattacccacttctccatgcag
ggctcaccccctctcttcctctgcctgctgtggaagatgctgctggagacagaccacatc
aaccagataggcttcagggtcttggaacgcatcggggctcgcgcgctggtggctcacgtg
cgcacatttgccgacttcctcgtgtacgagttctcaacttcagcaggcggacagcagctc
aacaagtgcattgaaatactcaacgacatggtctggaaatacaacatcgtcaccctggac
agacttatcctgtgtctggcgatgcgtagccatgaaggcaatgaggcacaggtttgttac
ttcataatccaactgctgctgctgaagcccaacgacttcaggaaccgagttaacgatttt
gtcaaggagaacgctcctgagcactggctgcagagtgactggcacaacaagcacatgagc
taccacaagaaatacccagagaagctgtactttgagggtctcgcagatcaggtcaaccct
cccatgcagctccagcatcagtacctgcccatttactttggcaatgtgtgtctgcgcttc
ctgcctgtctttgacatcgtcatccaccgcttcctggagcttcttcctgtctccaagtcg
ctggaaacactgctggatcatcttggaggcctttacaagttccatgaccgcccagtgacc
tacctctacaacacccttcactactatgagcgacacctgagagacagaaccaacctgaag
agaaagttggtgcatgccatcatgtcttcattgaaggacaacagaacccctggttggtgc
ctcagtgaaacatatctgaagtttggcatgaaccccagagaggacaacgtgtggatccct
gacgacacctactactgcaagctgattggacgtctggtggacaccatggcgggaaaatca
cccggcccgttccccaactgtgattggaggttcaacgagtttcccaatcctgcagcccac
gccctgcatgtcacctgcgtggagctgatggctttggctgtgccaggaaaagatgtgggc
aacgctctgctcaatgttgtgttaaagagccaacctcttgttcccagagagaatatcacc
gcctggatgaatgccattggacttgtgatcaccgcactgcctgaaccctactggattgtt
ctccacgaccgcatcgtgtctgtgatcagctctccggcgctgacgtcagagacagagtgg
gccggctatccattcgccttgctggacttcacagcctgccaccagagctacagcgaaatg
aactgcagttatgtgttagcattagcgcacgctgtctggcatcactcatccatcggacag
ctgtctctgattccaaaattcctgtcagagacactgaagcccatcgtccagacagagttc
cagttgctctatgtgtatcacctggtcgggccgttcctgcagcgcttccagcaggagagg
acacgatgcatgttggagattggcgtagccttctacgagatgctgcaggcggtggaccaa
cactgccaacatcttagctacatggacccaatctgtgacttcctctaccacatcaaatac
atgtacactggagacagtgtgaaggagcaggtggagaaaatcatcatgactttgcgtcca
gccatgaagctgcgtctgcgcttcatcacgcacagcagcaaggtagagacttcgtcatct
gctgctgctgctgccgccgccgccgcctcggcctctgcagctgcctcctccaacacccct
cagccctcttcttcctcctcttcactctcgtcctccgctgccgctgcctcaccctcctcc
acacagcacacacacacacctatgtag
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