Scomber japonicus (chub mackerel): 128377553
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Entry
128377553 CDS
T09718
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
sjo04517
IgSF CAM signaling
sjo04530
Tight junction
sjo04810
Regulation of actin cytoskeleton
sjo05100
Bacterial invasion of epithelial cells
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128377553 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128377553 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
128377553 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128377553 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128377553 (arpc1b)
05100 Bacterial invasion of epithelial cells
128377553 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128377553 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128377553 (arpc1b)
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Arp2/3 complex
128377553 (arpc1b)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128377553 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
RMC1_N
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
128377553
NCBI-ProteinID:
XP_053193488
LinkDB
All DBs
Position
2:12782408..12788012
Genome browser
AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIFKKDGAKWNKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGAWKPTLVILRINRAARCVKWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSGAESQASTGGGGWVHSVCFSHSGNRLAWTSHDSSLSLAE
GGKTSTVSSLSSETLPLLCVTFITENSLVAAGHDCYPMLFVFDGAKGSLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTEKDLNTLHKNSISQISVLEGGRNQCAKFCTTGMDG
GLGIWDVKSLESAMKDLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccatagcttcctgctggaaccaattagctgccatgcctggaacaaagatcga
acccagattgcgctctgtcccaacaaccatgaggtccacatcttcaagaaagatggggcc
aagtggaacaagatccatgaactgaaggagcacaatgggcaggtgacaggtattgactgg
gctccagacagtaaccgtatagttacttgcggagcagaccgtaacgcctatgtgtggacc
ctaaaagagggtgcatggaaacccaccttggtcatcctcaggatcaaccgcgcagcacgc
tgtgtgaaatggtcgccacgagagaacaagtttgctgtaggcagcggctctcgcctcatc
tccatctgctactttgagcaggaaaatgactggtgggtgtgcaagcatatcaagaagccg
atccgctccaccatcctcagcctggactggcatcccaacaacgtcctgctggcagctgga
tcctgtgacttcaaatgcagggtgttttcagcctacataaaagaggtggaggagaagcct
ggccccactccctggggcagcaagatgccgtttggagagatgttgtttgagtccggaggg
tccggagctgagagccaggcttcaacaggaggcggtggctgggtgcacagtgtgtgcttc
tcacactctggcaaccgcctggcctggacttcccatgactcctctctgtctcttgcagag
ggtggcaagaccagcacggtgagcagtctgagctctgagacacttcctctgctgtgtgtc
accttcattactgagaacagcttagtagcagctggccatgactgttacccgatgctgttt
gtgttcgacggtgccaaaggcagcttgacatttggtggcaagctggacgttcctaagcag
gcggcccagaagggcatcagtgccagggaacgtttccagaacctggaccgtcgtgcctcg
gagacccagagcaccgagaaggacctgaacactctccacaagaacagcatcagccaaatc
tcggtgctggaggggggaagaaaccagtgtgccaagttctgcaccaccggcatggatgga
ggactgggcatctgggatgtcaagagtctggagtctgctatgaaggacttgaagatagtc
tga
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