Scomber japonicus (chub mackerel): 128377580
Help
Entry
128377580 CDS
T09718
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
sjo04517
IgSF CAM signaling
sjo04530
Tight junction
sjo04810
Regulation of actin cytoskeleton
sjo05100
Bacterial invasion of epithelial cells
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128377580 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128377580 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
128377580 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128377580 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128377580 (arpc1a)
05100 Bacterial invasion of epithelial cells
128377580 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128377580 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128377580 (arpc1a)
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Arp2/3 complex
128377580 (arpc1a)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128377580 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
EIF3I
Beta-prop_HPS5
Rax2
RMC1_N
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
128377580
NCBI-ProteinID:
XP_053193522
LinkDB
All DBs
Position
2:12770555..12778441
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLISVIFVSENSLVAAGHDCCPMLFRCDDGGTLTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgctggagcccatcacctgccacgcgtggaaccgcgacagg
acacaaattgccatcagtcctaacaaccatgaagttcatatttacaagaagagtggcaac
cagtgggtgaagacccatgagctgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcagaccgtaatgcctatgtgtggtcc
cagaaggagggcgtatggaagcccacactggtcatcctcaggatcaaccgagccgccacc
ttcgtcaagtggtctccgctggagaacaagtttgcagtcggcagcggagctcgactcatc
tctgtctgctactttgaatctgagaatgactggtgggtgagcaagcacatcaagaaacca
atccgctccaccatcctcagcctggactggcatcccaacaacgtcctgctggctgctgga
tcctgcgacttcaaatgcagggtgttctcagcctacattaaggaagtggaagagaaacca
ggccccacaccctggggcagcaagatgccatttggggctgtgctagcagaatttggagga
gcaggaggagggggttgggtccactcagtctctttctctgcctctggtaaccgtctggcc
tgggtcagccatgacagcactgttactgtggtggacagctccaagactgccagtccttcg
cagctgaagacggagttccttcctctcatcagtgtcatttttgtgtcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgcgacgacggtgggacgctg
acatttgtgtctaagctcgacctccccaagcagagtatccagaggaacatctctgccatg
gagcgcttcaggaacatggacaagagagccaccacagaggaccgcaacactgccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgagggagacaaaagggattgt
cgcaagttctgcaccacaggcatcgatggagcaatgactatttgggactttaagagtcta
gaagcttctatccagggtctccgcatcatgtga
DBGET
integrated database retrieval system
