Scomber japonicus (chub mackerel): 128377626
Help
Entry
128377626 CDS
T09718
Symbol
sash1a
Name
(RefSeq) SAM and SH3 domain-containing protein 1a
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128377626 (sash1a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
128377626 (sash1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SASH1_Homeodomain
SPIDER
SAM_1
SAM_2
SH3_2
SHOCT-like_DUF2089-C
SH3_1
Motif
Other DBs
NCBI-GeneID:
128377626
NCBI-ProteinID:
XP_053193552
LinkDB
All DBs
Position
17:complement(17994021..18159539)
Genome browser
AA seq
1542 aa
AA seq
DB search
MTSNGPVIVYEWLKTLQLAQYVEPFVDNGYDDLEVCKQIGDPDLDAIGVYIPHHRQRIHD
AVRRLKEEAKETASGLYFTLEPIPPAAEMYTSHMVDQYESKLRGSKSWTEPNSDRVGRTG
GYMGAQRNLTLGNRRELVIYPKLKLKIMIRDKLIRDGINLARPPYSNKDGSLGNIDDLAQ
EYSEYYNTCFSDVSDRMEELRKRRVSQELDMEKQDPSSTSLQLRTEIQESLGFSSEVSTP
ETDRKMPLHKSSSEDGSGGKWDNKKKNKSFWQNFRKSQHKPVMRQTSKGEDIGYVASEIT
MSDEERIQLMMMVKEKMITVEEALARLKEYERSRQSSSTDTAEWTDGSAANLNQSSNCNS
REQSDDEQSEDSVKFKRLHKLVNSTRRVRKKLIKVEEGKKHGSEDFLNLEAPPTCEDNTA
LYTGVLKKPLLHQEASLPSLTQDQLSLDGDTDSLTTSPSSSSLDTWSGHKLVKTFSKSSS
AHGLIRPPRRTPAGSGGLGGSGVGGSGSSFSELDGCGLDDEGKLSRSTTDSEMRKALSSI
SHGVSNNEALYAFYGLTKPRPKPHAQSHLLISLDDGPQGSPKHQPANRHLGSWTHRKPDP
NYAYSTKHLLYQRSRNTKTPVSPLSVTPSSPVRCDVAKSKGFGSGGGGWVFPSRRLRGRT
AVSELNITYVVERSLYGHLNWAQLVRPVTLSRAERRCLLEEDREADRKWAASVDRCTKRV
LLRIQQKSRTCSFGGFDLSNRSLHVVNTGSEANNKEQEAIYREVVKSPTTSRISLGKKVK
SVKETMRKRMSKKYSSSLSEQSSPDGAPGSPQSPQPDTDSLEKPKLKAGGSVESLRSSLS
GQSSMSGQTVSTTDSSASNRESVKSEDGDDEEPPYRGPFCGRARVHTDFTPSPYDTDSLK
LKRGDVIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSEEEEKPKRPVRRRRKGRPPKPT
SVEELLERINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDPQHRAVLLTAVELLQE
YDSSSDPERSGLSGSQEKLLSEGRGLVGDSPRDSGCYESNENLENGKSRKASRSSRSSAG
LQSPDYPTLPMTLSTEALQQNSKNQRTKFPKNFFIKPSLKGFNLLGLRKAQRQSPIPASR
SCEDLDGPPQPAGPWKRSHSLGDLHWEQKFEQRKDLSVELKLTKEGLKLGNSSPSKVCRD
EGSPTQNGAPMVSPKRRADRPPVPSQLPLRPSCPTTQFPIPPEPLSSPTPSPPDSNASAD
RVIRTHPKKPPVPPPVPAKKSKERLVNGLRHPPLSLPSSPSPTPSPTHSLTRSHPSSPII
RSSSPSAPAPALPAKIPSTPTSPCVTSSASSMGEESGSPPTVPPPWFSDLGGKVAIARKV
SHAKMSPDLFTLLEQRLEAEGIDLTEEPYSDKHGRCGIPQPLVQRYSEDLEQLVKDVAST
MDQLRVKELRKQHRMAIPSGGLTEMCRKPLPSGNISTVSDWLISIGLPMYATSLATAGID
TLSHVALLTESSVWEAGVRDERHARRMISEAQLVSAHREVQS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaacggacctgtcattgtctacgagtggctgaagaccctccagctcgcccag
tacgtcgagcctttcgtggataatggttacgacgatctggaggtgtgcaaacaaatagga
gaccccgacctggatgccatcggcgtctatatccctcaccacaggcagaggattcacgac
gcggttagaaggctgaaggaggaagccaaagagacggccagtggactgtacttcaccctg
gagccgataccacccgcagctgagatgtatacaagtcatatggtggatcagtatgagtcc
aaactgcggggatctaagtcctggaccgagcctaacagtgaccgggttgggcgcaccggt
gggtacatgggcgcacagaggaacctgacgctgggcaacaggagggagctggtgatttac
cccaagctgaagctgaagatcatgatcagggataaactcatcagagatggcatcaacctt
gccaggccaccctactctaataaggatggttctcttggcaacatagatgaccttgcccag
gagtactctgagtactacaacacctgcttcagtgacgtcagcgaccgcatggaggagctg
cgcaaaagacgcgtctcccaagagcttgacatggagaaacaagacccaagcagcacctct
ctgcagctccgcactgagattcaggagtcattaggcttcagcagtgaagtgtccactcca
gaaacagacagaaaaatgcccctgcacaaatccagctctgaagatggatctggaggtaaa
tgggacaataagaagaagaacaaatctttctggcagaacttccgcaagtctcaacacaag
cctgtcatgcggcagacatccaaaggagaggacattgggtatgtggccagtgagatcacc
atgagtgatgaggagcgaattcagctgatgatgatggtgaaagagaagatgatcaccgta
gaagaagctctcgctcggctgaaggagtatgagcgcagcagacagtccagcagtactgac
actgcagagtggactgatggatctgcagccaatctaaaccagtcctcaaactgcaactct
cgcgaacagtcagatgatgagcaatcagaggactctgtgaagttcaaacgacttcacaag
ttggttaactctacacgccgggtcaggaaaaaactcattaaggtggaggagggcaagaaa
catggttctgaagattttctgaatctggaagcacctcccacctgtgaggacaacacagct
ctatatacaggggtcctgaagaagcccctgttacaccaagaggcctctctgccttctctc
acccaggatcaactctctctggatggagatacagacagtctgaccacctccccttcttcc
agcagcctggacacctggtctggacacaagctggtcaaaaccttcagtaagtcttccagt
gcccacggtctcatccgcccgcccaggagaacaccagctggctccgggggccttggaggc
tccggtgtgggaggtagtggctcctccttctcagagttggatggctgtggattggacgac
gaggggaaactgtcacgctccacgactgacagtgagatgcggaaggccctgagctccatc
tcccatggggtaagtaacaacgaggccctctatgccttctatggcctcaccaaacctcgc
cccaaaccccatgcccagtcccacctcctgatctccttggatgatggtccccaagggagc
cccaaacaccaacctgccaaccggcaccttggcagctggacacaccggaaacctgacccc
aactatgcttactcaaccaagcaccttctataccaacgctcgcgcaacaccaagacccct
gtctcccctttgtctgtcaccccctcctcccctgtccgctgtgatgtagccaaatcaaaa
ggttttggaagtgggggagggggttgggtgttcccctcacgcaggttgcgtggtcgaaca
gcagtcagtgagctgaacatcacctatgtggtagagcggagcctgtacggtcacctcaac
tgggcccaactggttcgtccagtaaccctcagtcgcgctgagcgccgctgtctattggag
gaggaccgtgaggcggacaggaagtgggcggccagcgtggaccgctgcaccaagcgtgtg
ctcttacgcatccaacagaagtctagaacctgcagctttgggggctttgacctgtccaac
cgctcgctccatgtggtcaacacaggttcagaggccaataataaagagcaggaggctata
tacagagaagtggttaaatcccccactacgtctcggatctcgctgggtaagaaggtcaag
tcggtcaaggagacgatgaggaaacgtatgtccaagaagtacagcagttccttgtctgaa
cagtccagtccagatggagctcctggttctccacagtcccctcagcctgacaccgattct
ctggaaaaacccaagctgaaggccggcggttctgtggaaagcctgcgtagttcactcagc
ggacagagttcaatgagtggtcagaccgtgagcactactgactcgtcagccagtaacaga
gaaagtgtgaagtcggaggacggtgacgatgaggagccgccttatagaggaccattctgt
ggtcgtgcaagagtccacactgacttcacccctagcccatacgacactgactccctcaaa
ctgaagcgtggtgatgtgattgacatcatcagtaagccacccatgggaacatggatgggc
ctgctgaataacaaagtgggcaccttcaagttcatctatgtggatgtgctgagtgaggag
gaggagaagcccaaaaggccagtgaggaggaggaggaagggccgaccgcccaagccaacc
tctgtggaggagctgctggagcgcatcaacctcaaggagcacatgcccactttcctgttc
aacggctatgaggacctggacactttcaagttgctggaagaggaggacctagatgagctg
aacatcagagaccctcagcacagagccgtactgctcactgctgtagagctgctgcaggag
tatgatagcagcagtgacccagagcgcagcggcctgtccggctcccaggagaagctgctg
tctgagggacggggcctggtgggagactccccacgggactccgggtgctacgagagcaat
gaaaacctggaaaatggtaaaagtagaaaagcttcccgttccagtcgttcttcagcaggc
cttcagtctccggactaccccacactgcccatgactctttccacagaggctctgcaacag
aacagcaagaaccagcgcacaaaattcccaaaaaacttcttcattaagccctccctgaag
ggattcaacctgcttgggctgcgcaaagcccaaagacagtcccccatcccagccagtcgt
agctgtgaggaccttgatggacccccacagcccgctggaccatggaaacgttcccactct
ctgggagatctgcactgggaacagaagtttgagcagaggaaggatctcagtgtggagctt
aaactcacgaaggaaggactcaaattgggcaatagtagccccagcaaggtctgtagagat
gagggttccccaacccagaacggagccccaatggtgagcccgaaaagaagggctgataga
ccacctgtgccctcacaactgcctctgcgtccctcttgtcccaccacccaatttcccatc
cctccagagcccctctcaagtcctactcccagcccacccgactctaatgcaagtgcggat
agggtcattcggactcaccccaaaaagcctccagtccctcctcctgttcctgccaagaag
tctaaagaaagactagttaacggcctccgacacccccctctctccctgccctcctcacca
tctcccactccttctcctacccattccctcacccgttctcaccccagcagccccataatc
cgcagcagcagccccagtgctcccgccccagctctacctgccaagatcccaagcacccca
accagtccctgtgtaacctcatcagcctcatccatgggggaggaatcaggcagtccacca
acagtgccgcctccatggttctcagacctagggggcaaggtggctattgcaaggaaggtt
tcccatgccaagatgagccctgacctgttcaccctgctggaacaacggctggaagctgag
ggtatcgatcttacggaggagccctactccgacaagcacggccgatgtggcatcccccag
ccgctggtgcaacgttattctgaggacttggagcagctcgtcaaggatgtagcctccacc
atggaccagctccgagtcaaagagctccgtaaacagcaccgcatggcaatcccctctgga
ggtttgacagagatgtgccggaagcctctgccctcaggtaacatcagcacagtctccgat
tggctcatctccatcggcctgcccatgtatgccacgtctctggcaacggcaggaattgac
acgctgagccatgtggccttgttaacagagagcagtgtgtgggaggcaggtgtgcgggac
gaaagacatgcccgtcggatgatcagtgaggcgcaattggtcagcgcacacagagaggtg
cagtcctaa
DBGET
integrated database retrieval system
