Scomber japonicus (chub mackerel): 128377764
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Entry
128377764 CDS
T09718
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128377764 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128377764 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128377764 (sptbn1)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128377764 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
128377764 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
128377764
NCBI-ProteinID:
XP_053193568
LinkDB
All DBs
Position
2:1013833..1047002
Genome browser
AA seq
2340 aa
AA seq
DB search
MMTTVAAEFEPMELQQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLMGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDITAYEERV
QAVVAVAKELEVEHYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNATKFSVND
SGYKPCDPQVIQDRVSHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSLEHGKDLTGTLRLLSEQRALEDEMSGRAGHLQHTIAEGQAMVEAGHFAASKIQDR
IADLQAQWAALEQLAAARKKRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRPVIDSLHEQAAALPKEEAESEMVQGRLAGIEERYKEVAELT
KLRKQALQDALALYKMFSEADACEVWIDEKELWLNSMEIPEKLEDLEVVQHRFESLEPEM
NNQASRVAVVNQIARQLIHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKDSLNSALGVQ
NYHLECNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AQRLAEEHPDQAKAITGRLAEITGVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEAAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINAERIQERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGMLLVSEKPETEAVVKEKLSALHSMWEDLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRRRKNLLVASREVHQFNRDVEDEI
LWVQERMAVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSQSLLQDESSD
AEAIRQRLADLQQLWRQLMEEAERRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSAVTMLKKHQIVEQAVEDYAEAVHLLSKTSRGLVSDGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDSVNRQADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIVDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQDDATRLQSAYAGDKADDIQRRESEVLEAWRSLLEACDGRRVRLMDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKSLLA
RKHYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPTPEPAVIEQEEEPLQSGVINQNGLPSDQDSPRDGVDGVELVNGLVERSSKEPSPTPSP
TSGRKSKTSQSSTLPSKNQDSGSQLEGLLHRKHEWEGQNKKASNRSWHNVFCVVIGQDLC
FYKDSKAAAQGVPYHAELPVSLKDAACDVASDYKKKKHVFKLRLTDGNEYLFQAKDEEEM
STWIQAILNAGAADVQSSNPGTPASGRAQTLPAESSPGKREKDKEKDKEKRFSLFSKKKQ
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggcggcggagttcgagccgatggagctgcagcagcagtacagcagc
agcgatacggtgaacaaccgctgggacgacgagtgggacaacgagaacagctcggctcga
ctgttcgaacgctcccgcatcaaagccctcgcagatgagcgcgaggcggtgcagaagaag
accttcactaagtgggtcaactcccacctgtccagagtctcctgcaggatcacagacctg
tacatggacctgagggatggacgcatgctcatcaagctgctggaggtcctatcaggagag
agactgccgaagcccaccaaaggccggatgcggatccactgcctggagaacgtggacaaa
gctctgcagttcctgaaggaacagcgggttcacctggagaacatgggatcccacgacatc
gtcgacggcaaccaccgactgacgctgggcctcatctggaccatcatcctccgcttccag
atccaggacatcagtgtggagactgaagacaacaaagagaagagatcagctaaagatgct
ctgctactgtggtgtcagatgaagacggccgggtatccaaacgtcaacatccacaacttc
agcaccagctggagagacggcatggccttcaacgccctcatccacaaacacagacctgat
ctgatcgactttgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttt
aacctggcagagcaacacctgggcctgaccaagctgctggaccccgaggatatcagtgtg
gaccatcctgatgagaagtcagtcatcacctacgtggtgacatactatcattacttctct
aagatgaaagctctgaaggtcgagggaaaacgtattgggaaggtgttggataacgccatc
gagacggagaagatgatcgagaagtacgagtctctggcgtcggacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactctctgatgggagtccag
cagcagctgcaggcgttcaacacctaccggaccgtggagaaacctccaaagttcacagag
aaaggaaacctggaggttctcctcttcaccattcagagtaaaatgagagcgaacaatcag
aaagtttacatgccccgagaaggaaaactcatctcagacatcaataaggcctgggagagg
ttggagaaggcggagcatgagagggagctggctctgaggacggagctgattcgtcaggag
aaactggaacagctggcgagacgtttcgaccgcaaggcggcgatgagagagacttggctg
agcgagaaccagaggctggtgtcacaggacaactttggtttcgaccttcaggccgttgag
gcggccacaaagaagcatgaagcaatcgagacggacattacagcgtatgaagagcgcgtg
caggctgtggttgccgtggcgaaggaactggaagtggagcattaccacgatattaaacgc
atcaccgccaggaaggacaacgtaatccggctgtgggaatacctgctggagctgctgaag
gcccgcagacagaggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgctgctgctgtctcaggattatgggaag
catctgctgggtgtggaggacctgctgcagaaacacgccctggtggaggctgacatcgcc
atccaggctgacagggtgaaggcggtctccaccaacgccaccaagttctccgtgaacgac
agcggctacaagccctgtgaccctcaggtcatccaagaccgggtgtcccacctcgagttc
tgctaccaggagctgacccagctcgctgcagaacgccgggcccgcctggaggagtcccgt
cgcctctggaagttcttctgggagatggccgaggaggagggttggatccgtgagaaggag
cagatcctgtcctctctcgagcatggcaaggacctgacggggacgctgcgcctcctcagc
gagcagcgtgccctggaggacgagatgagtggccgcgccggccacctccagcacactatc
gcagagggccaggccatggtggaggccggccacttcgctgcctcaaagatccaggatcga
atcgctgacctgcaggctcagtgggcagcactggagcagctggcagcagcgaggaagaag
aggctggaggaagctctggcgctgcaccagttccaggccgacgcagacgatgtcgacgcc
tggacgctggacgccctgcgtatcgtctccagtggagagacgggccacgatgagttctcc
acccaggctctggtcaggaagcacaaggacgcagcagcagaagtggcgagctaccggcca
gtcatcgactcactccatgagcaggccgccgcgctgcctaaagaggaggcggagtcagag
atggtgcaagggcggctggcgggcattgaggagcgctacaaggaggtggccgagctcaca
aagctgaggaagcaggcgctgcaggatgctctggctctctacaagatgttcagcgaggcc
gacgcctgcgaggtttggatcgatgagaaggagctgtggctgaacagcatggagatcccc
gaaaaactggaggacctggaggtggtacagcacagatttgagagtctggagccagagatg
aacaaccaggcgtctcgtgttgctgtggtaaaccagatcgcccggcagctgattcacaac
ggtcacccgagcgagaaggacatcaagacccagcaggacaaactcaacaacaggtggagc
cagttccgtgacctggtggaccagaagaaggactccctgaactctgctctgggtgtgcag
aactaccacctcgaatgtaatgagaccaagtcctggatcaaagagaagaccaaggtcatt
gagtccacgcaggagctgggcaacgacctcaccggtgtcatggccctgcagcgcaaactg
accggcatggagcgcgaccttgccgccatcgaggacaagctgggcgacctgcgaggcgag
gcccagaggctggcggaggaacacccggatcaggccaaggccatcacaggccgcctggct
gagatcaccggcgtctgggaggaaatgaagaacactctgaagacccgcgaggagtctctg
ggagaggccaggaagctgcagcagttcctgcgtgagctggatgacttccagtcctggctg
tcccgcactcagacagccatcgcctccgaggacatgcccaacacgctggctgaggccgag
aagctcatggcccaacacgaaggtatcaagaatgagatccagaactacgaggaggactac
cagaagatgcgagacatgggggagatggtgacgcaaggccagacagacgcgcagtacatg
ttcctgcgacagcggctgcaggctctcgacaccggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcccagtcccacgcttaccagctgttcctcagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacgtcctggctcacaccgagatgccc
accactctcgaggccgccgaggccgccatcaaaaagcaggaagacttcatgaccaccatg
gacgccaacgaggataagatcaacagtgttgtggaggccggcaggcggctggccagcgac
ggaaacatcaacgctgaacggatccaggagcgagttgcctccatcgacgacagacataag
aagaacagggaggctgcagtggagctgctgatgagactgaaggacaacagagacctgcag
aagttcctccaggactgccaggagctgtctctgtggatcaatgagaagatgctaacagct
caggacatgacctacgacgaggcccgaaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaggagtggctcgataagatccagaaggacggcatg
ctgctggtgtcggagaagccggagacagaggcggtggtgaaggagaagctgtcggcgctg
cacagcatgtgggaggatctggagtccaccacgcagaccaaagctcagtgtctgttcgac
gctaacaaggccgagctgttcacgcagagctgcgccgacctcgacaagtggctcggcggc
ctggagggtcagatccagtccgacgactacggcaaagacctgacctccgtcaacatcctg
ctcaagaaacaacagatgctggagaaccaggtggaggtgcgtcagcgggaggtggtggag
ctgcagagccaggtgaaggcgctcggtcaggaagtgaaggacactgacgaggtggacggc
cggcgccaggtggtggagaagaagttccaggagctgctggagccgctgcgccgccgcaag
aacctgctggtggcgtccagagaggttcaccagttcaaccgggacgtggaggatgagatc
ctgtgggttcaggagaggatggccgtcgccacgtccaccgaccacggacacaacctgcag
accgtccagctgctcatcaagaagaatcagactctacagaaggagatccagggccatcag
cctcgcatcgacgacatcctggagcgcagccagagcctcctgcaggacgagtcgtccgac
gccgaggccatcaggcaacggctggccgacctgcagcagctgtggcggcagctgatggag
gaggcggagcgtcgccacggccggctggaggaggcacacaaggcccagcagtactacttt
gacgcggcggaggcggaggcgtggatgagcgagcaggagctgtacatgatgtcagaggag
aaggcgaaggacgagctgagcgccgtcaccatgctgaagaaacaccagatcgtggagcag
gcggtggaggactacgctgaggccgtccacctgctgtccaagaccagcagaggactggtg
tctgacggacacccagagagtgagcggatcagcatgcggcagtctcaggtggataagctg
tacgccgggctgaaggacctatcagaggagcggaggggcaaactggacgagaggctccgc
ctcttccagctgaaccgagaggtggacgacctggagcagtggatcgctgagagggaagtg
gtggccggatcccacgagctgggccaggactacgaacacgttactatgttgcaggagcgt
ttccgggagttcgctcgggacaccgggaacatcggccaggagcgcgtggactctgtgaac
cggcaggcggacgagctgatcaacgcggggcacggcgacgcggccacggtggcggagtgg
aaggacgggctgaacgaagcctgggccgacctgctggagctcatcgacacgcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccacgacgccaaagagatcctggga
cgcatcgtggacaagcagaagaagctgccggaggaggtgggacgcgaccagaacaccgtg
gagacgctgcagaggatgcacaccaccttcgaacacgacatccaggcgctgggaactcag
gtgaggcagctgcaggatgacgcgacgcgcctgcagtcggcgtacgccggcgacaaagcg
gacgacatccagcggcgtgagagcgaggtgctggaggcgtggaggagtctgctggaggcg
tgcgacggccgccgggtccgcctcatggacaccggagacaagttccgcttcttcagcatg
gtccgagacctgatgctgtggatggaggacgtgatccgactcatcgaggcccaggagaac
cccagggatgtgtcctcggtggagttactgatgaacaaccatcagggaatcaaagctgag
atcgacgctcgtaacgacagtttcacttcctgcatcgagctcgggaagtcgctgctcgcc
aggaaacactacgcttcagaggagattaaggagaagctgctgcagctgaccgataaaagg
aaagacatgatcgataagtgggaggatcgatgggagtggctgcgactcatcctggaggtg
caccagttctcccgggacgcgggcgtggccgaggcctggctgctgggtcaggagccatac
ctgtccagcagggagatggggcagagcgtcgacgaggtggagaagctcatcaaacgccac
gaagccttcgagaagtctgccgccacctgggaggagcgcttctccgccctggagaggctg
actacgctggagcttctggaggtgaggaggcagcaggaggaagaggagcggatgaggaag
ccaccgactccagagccggctgtgattgaacaggaggaagaaccgctgcagagcggagtc
atcaaccagaacggactcccatcggatcaggactctcctcgggacggcgttgacggcgtg
gagctggtgaacggtttggtggagagaagctccaaggagccgagtccgaccccgtcgccg
acctccggcaggaagagtaagaccagccagtccagcacgctgccctccaagaaccaggac
tctggctcccagctggaaggactcctgcaccgcaaacacgagtgggaggggcagaacaag
aaggcgtccaacaggtcgtggcacaacgtgttctgcgtggtgattggtcaggatctgtgt
ttctataaggacagcaaggcggcggcgcagggcgtcccgtaccacgccgagcttcctgtc
agcctgaaggacgccgcctgcgacgtcgcctccgactacaagaagaagaaacacgtcttc
aaactcagactcactgatggaaatgaatatctgttccaagccaaagatgaagaggagatg
agcacctggatccaggccatcctgaacgccggcgccgccgacgtgcagagcagcaacccg
gggacgccggcgtcgggccgcgcccagacgctgccggccgagtccagccccggcaagaga
gagaaggacaaagagaaggacaaggagaagcgcttcagcctgttcagcaagaagaagcag
tag
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integrated database retrieval system
