Scomber japonicus (chub mackerel): 128377870
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Entry
128377870 CDS
T09718
Symbol
pex6
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisomal ATPase PEX6
KO
K13339
peroxin-6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128377870 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128377870 (pex6)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
128377870 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
RuvB_N
TIP49
DUF815
AAA_5
AAA_11
PEX6_4th
TsaE
AAA_7
NPHP3_N
nSTAND3
RNA_helicase
AAA_25
Mg_chelatase
AAA_24
AAA_18
AAA_28
Vps4_C
Parvo_NS1
IstB_IS21
AAA_14
AAA_17
PhoH
bpMoxR
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
128377870
NCBI-ProteinID:
XP_053193576
LinkDB
All DBs
Position
2:complement(1754553..1779395)
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AA seq
1067 aa
AA seq
DB search
MAAQVELCCLDTFPPHLSPLDGLLAPSHLASLLQDDSDPPTVLFTPQRPPSSGTPGILLR
VHPASEHDPPADPEPGGRLRLLTSRLFLRLHGLQRVGSTGTVRALKPVSLHRVVLGARSR
QSLRWAAAERFTGGLLELCSPGQWLLARQGDPLLLPGQLQHSDLLVLSCSPVLQGRITPD
TSLVVTDCCDWPEPPSAAAPCRPLRLCVSDFAHYADGLGGAGGGRSLLDNRKLLGSGFSG
FLQALECRVDVRVVDARRWGGVRGQQGGGGGVGVRGQQGGGGGGGVDVDNCVFVSKQLLL
RLGLFNQEWVKLSRPGVGVGVGGACRPPQPGHCDVRGGGRERLVSVVTVDLSESPDLQFH
DEAGFISETLWFNLTDGEETSTGACSVRVKRWQQTQQLSARRSDSFCRSASPPVAMELHI
QPVASPLYSSLGCYDNLLADHFDTPRLVAVGDVLTVPAGNHPDLLQSSEGINRCPVLFFR
VQQVQPSAETEEEEERGALLADRLHTSLYLGGSTSSRVPCCSVEGTSLWDSLSPPGLNGT
VDVLSSIIRPHLQHSSCLSGCTVLLHGPAGSGKVTSVSAASRRLHLHLLKVDCVTVCADT
PAAVEVKLTSVFQRADALQPCVLLLRNLQLLLRPRGGADEDGRVQAALCRLLSGTASSVV
VVATVCRPRELSGGVMAAFVHQVALESPDEEQRHAMLLILSREVQLGRDVNLERLSKLTA
GLVLGDLRALLVQAGRAACRRLIQTCSGSLEEDLCSSGVSVLNQDFISALETLQDAQSKS
IGAPKIPAVRWEDIGGLQQVKKEILDTIQLPLQRPELLGLGLTRTGVLLYGPPGTGKTLL
AKAVATECSMTFLSVKGPELINMYVGQSEENIREVFSRARSAAPCVVFFDELDSLAPSRG
RSGDSGGVMDRVVSQLLAELDALHSSVSVFVIGATNRPDLLDQSLLRPGRFDKLVYVGVN
EDRASQLQVLQAVLRKFQLDSTVKLQDLVQRCPSHMTGADLYALCSDAMATAVKRKICLI
DQGLDSEDSPVRLSDEDFSSALLNFKPSVSSDELLRYSNIQQKLTAA
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaggtagagctgtgctgtttggatactttcccccctcacctgagccctctg
gacggcctgctggcaccgtcccacctggcctcgctgctccaggatgactcggacccaccg
accgtcctcttcaccccgcagcggcctcccagcagcgggacaccgggcatcctgctgcgt
gtgcacccggccagcgagcacgatcccccggctgacccggagcccggtggccgcctccgg
ctgctcaccagccggctgttcctgcggctgcacggcctgcagcgggtgggcagcaccggg
acggtccgggccctgaagccggtcagcctccaccgggtggtgctcggagcccgcagccgg
cagagcctccgctgggccgcagctgagcggttcaccggcgggctgctggagctctgcagc
ccgggacagtggctcctggcccggcagggagacccgctgctgctgcccggacagctgcag
cactcagacctgctggttctgtcctgcagtccggtccttcagggtcggatcacccccgac
acttctctggtcgtgacggactgctgtgattggccggagccgccgagcgccgccgccccc
tgcaggccgctcagactctgcgtgtcggacttcgctcactacgccgacggcctcgggggg
gcgggggggggccgctcgctgctggacaacaggaagctgctgggctcgggcttctcgggc
ttcctgcaggcgctggagtgccgggtggacgtccgggtggtggacgcccggcggtggggg
ggggtcagaggtcagcagggtgggggtgggggggtgggggtcagaggtcaacagggtggg
ggtgggggcgggggggtggatgtggataactgcgtgtttgtgagtaaacagctgctgctc
agactcggcctgtttaaccaggagtgggtgaagctgtcccggccgggggtgggggtgggg
gtggggggggcctgcagaccgccccagccgggtcactgtgatgtcagaggggggggcaga
gagaggctcgtctccgtggtgacggtggatttgagtgagagtccagatctgcagtttcac
gacgaggccgggttcatatctgagactctttggttcaacctgacggacggagaggagacg
agtactggagcctgtagtgttagagtcaagcgttggcagcagactcagcagctctcggct
cgtcgctccgacagtttctgccgctcggcgtctccgcccgttgccatggagcttcacatc
cagccggtggcgtcgccgctgtacagcagcctcggttgctatgacaacctgctggccgat
cacttcgacacgccgagactggttgccgtgggagacgtcctcacagtcccggctggaaac
catccagacctgctgcagagctcagagggaataaacaggtgtccggtgctgttcttcaga
gtgcagcaggttcaaccgtcagcagagacagaagaagaagaagagagaggagcgctgctg
gccgacagactgcacacctcactctacctgggaggttctaccagcagtcgggttccctgc
tgctccgtggagggaacgtctctgtgggacagtttgtctcctccaggactcaacgggacg
gtcgacgtgctcagcagcatcatccggcctcacctgcagcacagcagctgtctgtcgggt
tgcaccgtcctccttcacggtccggcaggaagcgggaaagtgacgtcggtcagcgcagcg
agccgcagactccacctgcacctgctgaaggtggactgtgtgacggtttgtgccgacacc
cccgccgccgtggaggtgaagctgacttcggtgttccagcgagcagacgcgctgcagccc
tgcgtcctgctgctcaggaacctgcagctgctgctgcggcctcgggggggcgccgacgag
gacggccgcgtccaggcggcgctctgcaggctgctcagcggcaccgccagcagcgtggtc
gtcgtggcgaccgtctgccggcctcgggagctgtccggaggcgtcatggcggcgttcgtc
caccaggtggcgttagagagtccggacgaggagcagcgtcacgccatgctgctcattctg
agccgagaggttcagctcggcagagacgtcaacctggagcggctctccaagctcaccgcg
ggtctggttctgggggatctgagggctctgctggttcaggcaggccgagccgcctgcagg
aggctgatccagacctgttctggatccttggaggaggatctgtgttccagcggagtctcg
gtcctgaaccaggacttcatctcagctctggagactctgcaggacgctcagtccaaatcc
atcggagctccgaagatccctgcggtgcggtgggaggacatcgggggtctccagcaggtg
aagaaggagatcttggatacgatccagcttcctctgcagcgtccggagctcctgggtctg
ggtctgacccggaccggagttctgctctacggaccgccgggcaccgggaagaccctgctg
gccaaggccgtcgccaccgagtgctccatgaccttcctcagtgttaaaggtccggagctc
atcaacatgtacgtcggtcagagtgaagaaaacatcagagaagtgttcagcagagctcgc
tcggcggctccgtgcgtcgtgttcttcgatgagctggactcgctggcgcccagcaggggg
cgcagcggagactctggaggtgtgatggacagagtggtgtctcagctgctggcggagctc
gacgcgcttcactcgtccgtcagcgtgttcgtgatcggagccacgaaccggccggacctg
ctcgaccaatcactgctgaggcccgggaggtttgataaactcgtctacgtcggcgttaac
gaggaccgagcgtctcagctgcaggttcttcaggccgtcctcaggaagttccagttggac
tcgacggtgaagcttcaggatctagttcagcgatgtccgagtcacatgaccggcgccgac
ctgtacgcgctctgctccgacgccatggcaaccgctgtcaagaggaagatctgcctcatc
gaccaaggtctggactctgaagactctccggttcgtctctctgatgaagatttctcgtca
gcgttattaaacttcaaaccttcagtttcatccgacgagcttctgagatactcgaacatc
caacagaaactcacagctgcttaa
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