Scomber japonicus (chub mackerel): 128378240
Help
Entry
128378240 CDS
T09718
Symbol
ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128378240 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128378240 (ppl)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128378240 (ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
SR_plectin_7
Spectrin
ERM_helical
Motif
Other DBs
NCBI-GeneID:
128378240
NCBI-ProteinID:
XP_053193657
LinkDB
All DBs
Position
18:complement(232875..254272)
Genome browser
AA seq
1757 aa
AA seq
DB search
MFKKKSKSSVITQPKPTAPSSELSALIEKLQKNADKVEKNIYDVEQNINKDVSKINEGKQ
PLYQDDTNKRILNSLELLTGLDEDAVNAKRLQHPQAEMIAQDMRQLRERVMKLKEDHDRI
YHLTRSEGMPSINWGNMMDEKLDNLNNKGFGQDLPTVENEVEEHNIFHSEVEALAPHIST
SNDKDYVSSLQMKYNKLLAASTNRQHNLLSLRDYMQRCTNELYWMDQQADERVNYDWSDS
NLDYPARQRQYENFISKCLESKEATVTKLNDDGDKLITAQHPGKNVIEAHMEAVHADWKE
YLNLLICEENHLKHMDEYNKYHKEARDTQELLKRLDTEVNQKYNPEFKDVYQMEGLIGEL
DDQSKAVDHFDERVKSLQKRSLQVLPLKYRRETPQKLLPIEALCEFDTDDGAILRGERYT
LLRNNGTKWDVKDAAGHKITAPAVCFMIPPTDPEAVAISDNLASQQKALKQKMASSKSTL
VKRYDELKKTTGTGTDTQEQQCRQLMAGLDKVISDLDKQEKAIHARVRPPLEQNRPLQDS
ADRLQDMRDIAAAVNKIEPEKTSKVQEAKSFLVSNPTRVSAPQLHSKVDEADKKYTKVEQ
LLQVSQEKLKDSNQLETSLQNGKNLLSTYENKLAREEVAPADISSLEKTQRELADIASDL
RSKRSVITDTEQNLRSAKNSCDNMATKFQEHCPDIERQEADVQKLNKRFNNLNRQIDTRS
QSLQRAKMSYNNYRNDYDNLNNWLSRVPNYEPRETDDVRQVETKLKNQKNLLSDIARKES
DLNNVSKNAQLYQQAIKDYETETEKFRSILDLEDGLVPQTYKRSRLESPALTVKAEEAAI
ETKFTEVNAVNKQKLQNLEFTQGLLNQQPEIPMIQTTNVKSVNAAPPGEEPWRIKKQLED
EVQRREQLEKEIETIQTDIYVLEGQKPQDTIVKKELIKKVPDPQLDEEVHKVQQKLSEER
RTTHALENDLEVLKLKLRGLETEVKEGAQQYTVKEVLRIERDRGQEEEVRKLREDLEELK
RQRLMKENEVIKIQKQVTVLAEEKSKEQEVITEEEVIKVQNDPQLQTEYRVLLDRKQKEM
DGRKQLEDELQFLQEKLRRLEKEKAMAEEKISIREVLKVEKDVTFEREVENLRRQYEDEK
SKRRSSQREKADLQRKITSLEEEKSKVIVKEKVREIVRPDPKAENEVANLRLELVEHQRR
CKDAELQLKSMQDELTMLRNRGPQIEVKEIIQEVIKYKTDPQTERELERLRNEIVDKTHQ
TEKSEMEIRQLRDDIQRWKDTKPQVQTKEVLNEVLQYREDPKTKEEIETLKRKLADEQKK
RLDLEGDRSALEEKIRLRKLDLSQVREKVVQQEVIKMEEDALLKSECNTFLQNISHEQTQ
KDNLKTELLQLQRQKADLDLQLEELERERRARRDAELEIQRLRVRLNELEIRDKETREKV
TVKQKVVLQQDPQQEKEHSILKLQLDEEKHKRTLLEKELNALLQKQVTLEKMDVKERVVR
TEKVQVERDPEAEREIEDLRRTLEEEKNKRRELDLDLSNLTSRLSDMEFSKTKSSKELDY
IRDESNRIQQENQRLQNEIRKLRSEIEITSKETRLITESAPRDDGKNLELRLDSLQRELT
ELKSITTQKDEEIEKLQKNLNAVRMKREQRESHLRRSIVVIDPDTGKEMRPEEAYKLGLI
DWKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGKKFSIDDALRLGHITNRQLQQYIN
KEITIQEFGVMVSGKNK
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaaagagcaagtccagcgtcataacgcaaccgaaaccaaccgctccctct
tcagaactgagcgctctgattgagaagctgcagaagaatgcagataaagtggagaagaac
atctatgatgtggagcagaacatcaacaaggatgtgagtaagatcaatgaggggaagcag
ccgctgtaccaggatgacaccaacaagagaatcctgaactctctggagctgctcaccggt
ctggatgaggacgcagtcaacgccaagcgcctccaacacccgcaggctgagatgatagcg
caggacatgaggcagctgcgtgagagagtgatgaagctgaaagaggaccatgaccgtatc
taccacctgacccgcagtgaagggatgcccagcatcaactggggaaacatgatggatgag
aaactggacaacctgaacaacaagggcttcggtcaggacctgcccactgtagagaatgag
gtggaggagcacaatatcttccacagcgaggtggaggcactggctcctcacatctccacc
agcaatgacaaggactatgtcagtagcctccagatgaagtacaacaaactgctggccgcc
tcgactaatcgtcagcataacctgctaagcctgcgtgactacatgcagcgctgcaccaat
gagctgtactggatggaccagcaggccgatgagagggtcaactacgactggagtgactct
aacctggactacccggcccgtcagaggcagtatgagaacttcatcagtaaatgtctggag
tccaaagaggccactgtcaccaagctcaatgatgacggagataagctgattactgctcag
catccagggaagaatgtgatagaggctcacatggaggcagtgcacgctgactggaaggag
tacctgaacctgctcatctgtgaggaaaaccacctgaaacacatggatgagtacaacaag
taccacaaggaggcacgtgacactcaggagctgctgaagaggctggatacagaggtcaac
cagaaatacaacccagagtttaaagatgtgtaccagatggagggtctgataggagagctg
gatgaccagtccaaggccgtggaccacttcgatgagcgggtcaagtctcttcagaagcgc
agcctgcaggttttgccactgaagtatcgcagggagaccccccagaagctgctgcccatt
gaagctctgtgcgagtttgacacagatgatggggcgatattgcgtggagagaggtacact
ctgctccggaacaatggcaccaagtgggacgtgaaggacgcagctggacataaaatcact
gccccggccgtctgtttcatgatacctcccactgacccagaggcagtggcaatctctgac
aacttggccagccagcagaaagctcttaagcagaagatggcaagcagcaagtcaactctg
gtgaaacgctatgatgagctgaagaagaccactggtactggaacagacacacaggagcag
cagtgccgccagctgatggctggtctggataaagtcatcagtgacctggacaaacaggag
aaagccattcatgctcgagtgcgcccgccgctggagcagaacaggccactgcaggacagc
gctgaccggctgcaggacatgagggacattgccgctgctgtcaataaaatcgaaccagag
aagacgtctaaagtgcaagaagcaaagagcttcttggtgtcaaacccgacccgtgtcagt
gctcctcagcttcacagcaaggtggatgaagccgacaagaagtacaccaaagtggagcag
cttcttcaggtttctcaggagaaactgaaggattccaaccagctggagacctcacttcaa
aatggaaagaatttactgtccacttatgagaacaagctggccagagaggaggttgctcca
gctgacatctcctcactggagaagacacaacgggagcttgcagatattgcatcagacctg
agatccaagaggtcagtgatcacagacacggagcaaaacctgcgctcagccaagaacagc
tgtgacaacatggctaccaaattccaagagcactgtccggacattgagaggcaggaagct
gatgtccagaagctgaacaagcggttcaacaacctcaataggcagatcgacaccaggtct
caaagcttgcagagagccaagatgtcatacaacaattaccgcaatgattatgataacctg
aacaactggctgtctcgtgtcccaaactacgagccccgtgaaactgatgacgtaagacaa
gtggagaccaagctgaagaatcagaagaacttgttgtctgatattgcaagaaaggagtct
gacctgaacaatgtctccaaaaatgcccagctttaccaacaagctatcaaagactacgag
actgaaactgagaagttcagatctatccttgaccttgaggatggacttgtacctcagaca
tacaagaggagcagactggaatcacctgcactgacagtcaaggcagaggaagctgctatc
gagacgaagtttaccgaggtgaatgccgtgaacaagcaaaagctgcagaatctggagttc
acccaaggccttctcaaccagcaacctgaaatccctatgattcagactacaaatgttaag
tctgtcaacgctgctcccccgggtgaagagccttggagaatcaagaaacagctggaagat
gaggttcagaggagggagcagctagagaaagaaattgagactatccaaacggacatctac
gtccttgaaggacagaaaccccaagatacaattgtcaagaaggagctgatcaaaaaggtc
cctgatcctcagctggatgaggaagtccacaaggtccagcagaaactctcagaggagcgc
cgcactacccatgccttggagaatgatcttgaggtactaaagttgaaactacgtggcctt
gagacagaggttaaagaaggagcacagcaatatacagtgaaggaggttttgcgtattgaa
agggaccgtggtcaggaggaggaggtgcgcaagcttcgagaggacctggaagagctaaaa
aggcagaggttgatgaaagaaaacgaggtgataaaaatacaaaagcaggtgacagtcctg
gctgaggagaagagcaaggagcaggaggttatcactgaagaagaggtgatcaaagtccag
aatgacccccaacttcaaacagagtacagagtgctccttgacaggaagcagaaggaaatg
gatggcaggaagcagctggaggatgaactgcagttccttcaagaaaagctccgaagactg
gaaaaggagaaagcaatggcagaggagaaaatttccatcagggaagtgctgaaagtagag
aaagatgttacctttgaaagggaggtagaaaacctcaggaggcagtatgaagatgagaag
tctaaacgaagatcatcacagcgagaaaaggctgacctccagaggaaaattaccagccta
gaagaggagaaatccaaggttattgttaaggagaaggtgcgggagattgtccgccctgac
cccaaggctgagaatgaggtggccaatttgcggcttgaacttgtagagcaccagaggcgc
tgtaaagatgcagaactccagcttaagtccatgcaggatgagctgaccatgctgaggaac
agaggacctcaaatagaagtcaaagagatcatccaagaagtcatcaagtacaagacagat
ccacagactgaaagagagctggagagactccgcaatgaaatcgtagataaaactcaccag
actgagaaatctgagatggaaatccgccaacttcgtgatgacattcaaagatggaaagac
accaaaccccaagtgcagaccaaagaggtgctcaatgaagtgctgcagtacagagaagat
cccaagactaaggaggagattgaaactctcaaaagaaaactggctgatgaacagaagaaa
cgccttgacctggaaggagatcgatcagccctcgaggagaagatcagactgaggaagttg
gatctgtctcaggttcgtgagaaggttgtccagcaagaagtaatcaaaatggaagaggat
gctttactcaaatcagagtgtaacaccttcttgcaaaatatcagccatgagcagacacaa
aaagacaacctgaaaacagagcttctacaactgcagagacagaaggctgatctggatctg
cagctggaggaactggagcgtgaacgtagggcaagacgtgatgctgagctggagatccaa
agactccgggtcagacttaatgagctagagatccgggacaaggagacccgtgagaaggtg
acggttaaacagaaggtagtcctgcaacaggatccccaacaggagaaggagcactccatc
cttaaactccagttggatgaagagaagcacaaacgcaccctgttagagaaagagctgaat
gcccttctccagaagcaggtcacactggagaagatggatgtgaaggaaagagttgttcgc
acagagaaagtccaagttgagagggacccagaggcagagcgtgagattgaggacctaagg
agaactctggaagaggagaaaaataaaaggcgagaacttgacctggacttgtccaacctc
acttcaaggctttctgatatggagttctctaaaacgaagtcatctaaggaactggactac
atccgtgatgaaagtaatcgtatccagcaagaaaaccaaaggctgcagaatgagatccgc
aagcttcggtccgagattgagatcaccagcaaagagactcgccttatcactgagtccgca
ccaagagacgatggaaagaacttggagttgagacttgactcactacagagggaactaact
gagctaaaaagcataaccacccagaaggatgaggagattgagaagcttcaaaagaacctg
aatgcagtgagaatgaagagggaacagagagagagtcatctccgtaggtctatcgttgtc
attgatccagatacaggcaaagagatgcgaccagaggaagcctacaagctggggctgatc
gactggaagatgttcgttaacctgcagagccaggagtgtgactgggaagagatctcagtc
aagggcccaaagggagaatcctcggttcttcacgaccggaaatcagggaaaaagttctcc
attgatgatgcattgcgtctcgggcacatcacaaatcgccagcttcagcagtacataaac
aaagaaatcaccatccaggagtttggtgtaatggtgtcaggcaaaaacaagtaa
DBGET
integrated database retrieval system
