Scomber japonicus (chub mackerel): 128378243
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Entry
128378243 CDS
T09718
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128378243 (rrn3)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
128378243 (rrn3)
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Sigma70_ner
SbcD_C
Motif
Other DBs
NCBI-GeneID:
128378243
NCBI-ProteinID:
XP_053193666
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Position
18:complement(412678..426210)
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AA seq
610 aa
AA seq
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MEIDGRDFMNSPPVKTVRFGGSVAETLAKHKRGDCGDYELLRHQLADPEIKDAQIINWLQ
EFRGCVTQLTKDHEQLIYTVLRLPWVGRSQAVVEEYMAFLSNLVSAQTVYLCACLKMVVS
HFTPKRVTICEGGVDISDSDDEDENLPRNFDQCHQALQLITKYVPSTSRFLMPILQENFP
FIQKSSRTLEFYVHNLLRVTVYIPSIRRDVLELIIGKMLKLDVSASRSDIEEAEETAEHS
QQAEEHTEEGLFDMDEDVSADQPSRTAVMAHPVAERLDSLMAVLLAYIKDVCHLNGSFHV
ERTKELYKELLSVFDKLILPTHASCHVQYTLFYLCSFRLALAEAFLEHLWKILQNPSQPA
VLRQAAAGYMGSLLGRAKFIPVITVRACLDLLISWIHRYIDSQDNSGKQAYCDISLHGPF
YTACQAVFYTLIFRHGAILGGNMKKGLEYLQSLNLERVVMCQLNPLKVCLPSVTNMFAAI
TRKYQVVFCYTIIERNNRAVLPVVRSSAGGDRVTTNTNPLDSFFPFDPYLLKRSGQVIEP
LYQVWEEPADTELLVTKAGQQASREDEDDFLCGEPAQADGIVGMTPSSFESNLRSPSSVG
SPPFNFQRHF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagatagacggccgggactttatgaacagtcctcctgtgaagactgtcaggtttgga
ggcagtgtagctgaaacgttagccaaacacaaacggggagactgtggtgactatgagctg
ctcagacaccagctggctgatcctgaaataaaggatgctcagatcatcaactggctgcaa
gagtttcgaggttgtgtgacccagctcaccaaagaccatgaacagctgatctacactgtg
ctgaggcttccctgggtgggtcgcagccaggctgtggtggaggagtacatggccttcctc
agtaacctggtgtcagcacagactgtctacctgtgtgcctgcctcaagatggttgtgtcc
cacttcactcccaagagagtgaccatctgtgaaggaggagttgatatctctgattcagac
gatgaagatgagaacctccccaggaactttgaccagtgtcaccaggctctgcagctcatc
accaaatatgttccatccacaagtcgcttcctgatgcccatcctgcaggagaacttcccc
ttcatacagaaatcctccagaactctggagttttacgtccacaacctcctcagagtgact
gtgtacataccgtccatcagacgagacgtactggagctcatcattggaaagatgctcaaa
ctggatgtgagtgcctcccgctcagacatagaggaagcagaagagaccgcagagcacagc
cagcaggcagaggagcacacagaggaaggactctttgatatggatgaggacgtgtcagct
gatcagccctctaggacagcagtgatggctcacccggtggctgagaggctggactctctc
atggcggtgctgttggcgtacattaaagatgtctgccatcttaacggctcttttcatgtg
gaaaggaccaaggagctgtataaggaactgttgagtgtgtttgacaagctcattctgcca
acacacgcttcctgtcacgtccagtacacactcttctacctgtgcagtttcagactggcc
ctggcagaggccttcctggaacacctgtggaagatcctgcagaatccctctcagcctgca
gtcctccgtcaggctgctgcaggatacatgggaagcttgctgggcagagccaagttcatc
cctgtgatcactgtgcgggcttgtctggacctgctcatttcatggatccatcgctacatc
gacagccaggacaacagcggcaaacaggcctactgtgacatcagcctgcacggacccttc
tacaccgcctgccaggccgtcttctacacactcatcttcagacatggagccatcctgggg
ggcaacatgaagaaaggtctggagtacctgcagagtctgaacctggagcgggtggtgatg
tgtcagctgaatcctctcaaagtgtgcctgccgtcagtcaccaacatgtttgctgccatc
accaggaagtatcaggtggtgttctgctacaccatcatagagaggaacaaccgtgctgtg
ctgccggtggtccgcagctctgcaggaggagaccgtgtgaccaccaacacaaacccactg
gacagcttcttcccttttgacccctacttgctcaagaggtcaggtcaggtgattgagcct
ctgtatcaggtgtgggaggaaccagcagacacagagctgcttgtcaccaaagcaggccaa
caggcctcgagggaggacgaggacgacttcctgtgcggggagccggcccaggcagatggc
attgtgggaatgacgcccagctcttttgagtccaacctccgcagcccgagcagtgtgggc
tcaccccctttcaacttccagagacatttctag
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