Scomber japonicus (chub mackerel): 128378244
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Entry
128378244 CDS
T09718
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128378244 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128378244 (gspt1l)
03012 Translation factors [BR:
sjo03012
]
128378244 (gspt1l)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128378244 (gspt1l)
Translation factors [BR:
sjo03012
]
Eukaryotic type
Release factors
128378244 (gspt1l)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128378244
NCBI-ProteinID:
XP_053193667
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Position
18:complement(439045..456514)
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AA seq
576 aa
AA seq
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MDPRDTAPDSWEQEDDVEATLDGQLDSAFTNLNVNAKPFVPNVNAPEFVPSFTAKAHSED
LDSAVAVEKISTMEVSESAAPVENGDSEMTTEEPWDQKEAEPNEEEPGGGDRGPAVAATT
EETAPEMMEEEEETPAPKVPPTQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMVEK
RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPGHK
SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMD
DPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTDMCSWYTGLP
FIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHTVEV
LSLLSDDVETDDAAPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHK
SIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRTAGTI
CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccctgattcctgggaacaagaggacgatgtggaggccaca
ctcgacggacaacttgattccgctttcacaaacctgaatgtgaacgcgaaaccgtttgtg
cccaatgtaaacgcccccgaatttgtcccgtcttttaccgcgaaggcacactcggaggac
ctcgactctgcggttgctgttgaaaaaatatccaccatggaggtgtcagaaagtgctgct
ccagtggagaatggcgactcagagatgaccacagaggagccatgggaccagaaagaggcg
gagcctaacgaggaagagccaggaggcggggaccggggcccagcggtggcagcgacgacg
gaggagacggccccagagatgatggaggaggaagaggaaacaccagcgcccaaggttcca
cccacacagccagacgcccccaagaaggaacacatcaacgttgtgttcatcggacacgta
gatgctggcaagtccaccattggcggacaaatcatgtatctaacaggcatggtagaaaag
agaaccttagagaagtacgagagagaagccaaggagaagaaccgagaaacttggtatctg
tcttgggctttggacactaaccaggaggagagggacaaaggcaaaacagtggaggtgggc
cgagcgtactttgagacagacaaaaagcactttaccatcctagacgctccaggccacaag
agctttgttcccaacatgattggaggtgcatcgcaagcagacttggctgtactggtgatc
tctgccaggaaaggcgagtttgaaactggttttgaaaaaggtggacagacgcgggagcac
gccatgttggccaaaacagccggcgtgaagcacctgattgttctggtgaataaaatggat
gaccccacagtcaactggagcctggagaggtatgaagagtgtaaggagaaactagtgcca
tttttgaagaaggtgggtttcaacccgaagaaagacattcacttcatgccgtgctctggg
ctgacaggagccaacctgaaggagcccactgacatgtgctcctggtacacaggtttacca
ttcattccacatctggacagtttgccaaatttcaacagatcaagtgatggacctgtcaga
ttgcccattgtagacaaatacaaggacatgggtactgtgattctgggcaaactagagtca
ggctctatcagtaaagcacagcagctggtcatgatgccaaacaggcacacggtggaggtg
ttgagcctcttgtcagatgatgtggagacagacgacgcggctccaggtgagaacctcaag
ttgcggctgaagggcatcgaggaggaggagatcctgcccggcttcatcctgtgtaatgct
gagaacctctgccactcggggcgcaccttcgatgcccagattgtcatcattgaacacaaa
tccatcatctgtccaggttacaacgcagtccttcacattcacacctgcatcgaagaagtg
caaatcacggccttaatctgtctggtagacaaaaagacaggtgacaagagtaagacacga
ccacgattcgtcaaacaggaccaggtctgcatcgcccgtctgcgcacagcaggaaccatt
tgcctcgaaacttttaaagactttcctcagatgggacggtttaccttacgagacgaaggt
aagaccatcgccatcggtaaggtgctgaagctggttgccgagcgggactga
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