Scomber japonicus (chub mackerel): 128378284
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Entry
128378284 CDS
T09718
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378284 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128378284 (gfap)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
128378284 (gfap)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
128378284 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
GAS
BLOC1_2
HALZ
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
128378284
NCBI-ProteinID:
XP_053193719
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All DBs
Position
18:24411611..24418810
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AA seq
451 aa
AA seq
DB search
MESQRVQSSYRRRFGFTSSSSTGVRIGSLSSGRYSWHGTPRTLTHSSPVSRISLGSTSMA
MLGGSTGDRLDFSADSLMKSQFKETRTNEKVEMMGLNDRFASYIEKVRLLEQQNKVLVVE
LNQLKGKEPSRLGDIYQEELRDLRRQVDSLTSGKARLEIEKDSLAADVSTLKQRLQEEMG
LRQDTENSLNTYRQDVDEASLNRVQLERKIDALQDEILFLKKIHEEELREFQEHIMAQQV
HVDQDVSKPDLTAALRDIRVQYETMASSNMQETEEWYRSKFADLTDAANRNAEALRQAKQ
EAHEYRRQIQVVTLDLEALRGTNESLERQLREMEDRFSMETTGYQDTVSRLEDETHGLKE
EMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFSNLQFRETNLETKMPE
PHVKRSILVRTVETRDGEIIKESTTEHKDLP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtccagtcctcttacaggagacgttttgggttcactagctccagc
agcacaggggtcagaattgggagcctttcctcaggccgctactcctggcatggcacccct
cgcaccctaacccactccagccccgtctcccggatctccctgggctccaccagcatggcc
atgctcggagggagcacaggggaccgactggacttctcagctgattccttgatgaagtcc
cagttcaaggagacgcgcaccaacgagaaggtggagatgatgggcctgaacgaccgcttt
gccagctacatcgagaaggtgcggctgttggagcagcaaaacaaggtgctggtggtggag
ctgaaccagctgaaggggaaggagcccagtcgccttggagacatctaccaggaggagctg
agggacctgagaaggcaagtggacagtctcacctctggcaaggcccgtctggagatagag
aaggacagcctggctgcggatgtgagcacgctcaagcagaggttgcaagaagagatgggc
ctccgacaggatacagaaaacagtttgaatacctacagacaggatgtggacgaggcttct
ctaaatcgtgtccagttggagaggaagattgatgccctgcaggatgagatactcttcctg
aagaagattcacgaggaggagctgcgtgagttccaggagcatatcatggctcagcaggtg
catgtggaccaggatgtgtccaaaccagacctgactgctgctctgagagacatcagggtc
cagtatgaaactatggcctcttcaaacatgcaggagacggaggagtggtatcgctccaag
tttgccgacctgacagatgcagccaatcgtaacgcagaagctcttcgccaggccaagcag
gaagcccatgaatatcgccgtcagatccaagtggtgaccttagacctggaggctctccgt
gggacaaacgagtctctggaacgtcagctccgggagatggaggaccgcttctccatggag
acgaccggttaccaggatacggtgagccgcctggaggatgagacccacgggctgaaggag
gagatggccagacacctgcaggagtaccaggacctcctcaacgtcaaactggccctggat
atcgagattgccacctacaggaagctgctggagggggaggagagcaggatcactattcca
gttcaaagcttttccaacctgcagtttagagaaactaatctggaaactaaaatgccagag
ccccacgtgaagaggagcatcctggtacgaactgtggagaccagagacggggagatcatt
aaggaatcaaccactgaacacaaagatcttccttga
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integrated database retrieval system