Scomber japonicus (chub mackerel): 128378317
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Entry
128378317 CDS
T09718
Symbol
mcoln1b
Name
(RefSeq) mucolipin-1b isoform X1
KO
K04992
mucolipin 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128378317 (mcoln1b)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128378317 (mcoln1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128378317 (mcoln1b)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128378317 (mcoln1b)
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Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
128378317
NCBI-ProteinID:
XP_053193770
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Position
18:8471029..8481453
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AA seq
571 aa
AA seq
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MASSSYTCIHDSATEKDKLLSSVPSYGSHGLLGSGSPRPTDLVGSECCQQHEEVEEEEAL
RRKLKYFFMSPCDKYHAKGRKPFKLVMQLLKIFIVTVQLVLFGLSNQMVVTFKEENTAAF
KHLFLKGYRDNVPQAVHTQEELYSHINFAIEQYLALPQISLGRYAYVLGVGVNGSALSLC
QRYYRNGTIDPVNDTFDIDPHVVTDCIGLNPLTYEPAPGNSDYKNFTLKFYKLINVTVDF
QLKAINIQTIINNEIPDCYTFAITVVMDNKAHSGKVKITLQNQAYIKECKDPNVSGHAES
YARELYDVVVAFVCLVSLLLCGRSILRGILLQHEYVQFFKNRLGRSVSWGDRMEFINGWY
LLLMISDIFTIIGSFIKIGIESKTLSSYDVCGILLGTSTLLVWVGVIRYLSFFQKYNILI
VTLRAAFPNVIRFCCCAAAIYLGYCFCGWIVLGPYHTKFRSLSMVSECLFSLINGDDMFV
TFAEMEQSSALVWIFSQVYLYTFISLFIYMVLSLFIALITGAYDTIMAQTQEQVRVTDLS
AFIAECTDTPSSGKFRGPEGSSCSFFCCCDW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcaagttacacctgcatccacgacagcgccacagagaaagataagctgctc
tcctctgtgcccagctatgggtcccatggtcttctggggagtgggagcccccgtcccact
gatctggtgggctctgagtgttgccagcagcatgaagaggtggaggaggaggaggccctg
aggaggaagctcaagtacttcttcatgagcccttgtgacaagtaccacgccaagggtcgc
aagcctttcaagctggtcatgcagctgctcaaaatcttcattgttacagtgcagttggtg
ctgtttggacttagcaaccagatggtggtgacatttaaagaggaaaacacagcagcgttc
aaacaccttttcctgaagggttatcgggacaacgttcctcaggccgtgcacacacaagag
gagctttacagccacatcaacttcgccatagagcagtacctggctcttcctcagatctca
ctgggacggtacgcctacgtgttaggtgtgggtgttaacgggagcgcgctctccctctgc
cagaggtactacaggaatggcaccatcgaccccgtcaatgacacgtttgacattgaccct
cacgtcgtcaccgattgtattggactgaatcccctgacttatgaacctgctccaggaaac
agcgactacaagaatttcactctcaaattttacaagctaatcaatgtaacagtggacttc
cagctgaaggctatcaacattcagaccattataaacaatgaaatcccagactgctacacc
tttgctatcacggtcgtcatggataacaaggcgcacagcggcaaagttaagatcactctc
cagaaccaggcctacataaaggagtgtaaagatcccaacgtgtctggacatgctgagagc
tacgctcgggagctctatgatgtggtggtggcattcgtttgtctggtgtctctgttgctg
tgtgggcgctccatcctcagaggtatcctgctgcaacatgagtatgtgcagttcttcaaa
aacaggcttggccgcagtgtgagctggggagacagaatggagttcattaacggctggtat
cttctgctcatgatcagtgacatattcaccatcatcggcagcttcatcaagattgggatt
gaatccaagactttgtcatcgtatgatgtgtgtgggatcctgctgggaacctccaccctg
ctggtgtgggtgggagtcatccgctacctcagcttctttcagaaatacaatatcctgatt
gttacactaagagctgcttttcctaatgtcatccgcttctgctgctgtgcagctgctatt
tatttgggatattgcttctgtggatggattgtgctggggccttatcataccaagtttcgc
tccctgtccatggtatccgagtgcctgttttctctgatcaacggagacgacatgtttgtc
acgttcgccgagatggagcaaagcagtgccctggtgtggatcttcagccaggtctacctt
tacaccttcatctccctcttcatctacatggtgctgtccctcttcatcgcgctcatcacc
ggagcctacgacaccattatggctcaaacacaggagcaggtgcgcgtcacagacctgagc
gccttcatcgcagagtgcacggacacacccagctcgggcaaattccgcggtcctgaaggg
tcgtcatgctccttcttctgctgctgtgactggtga
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