Scomber japonicus (chub mackerel): 128378339
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Entry
128378339 CDS
T09718
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128378339 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128378339 (srebf1)
04131 Membrane trafficking [BR:
sjo04131
]
128378339 (srebf1)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
128378339 (srebf1)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128378339 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
128378339 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
128378339
NCBI-ProteinID:
XP_053193800
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All DBs
Position
18:complement(15319741..15336139)
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AA seq
1189 aa
AA seq
DB search
MNNLSFDDASLDNLDPTLSLNDPSDIDTALLSDIDDMLQLINNQDMEFGGLFDPPYTGPA
PTQELPPLTQSITSAAPPSTTPTPPSTSSSSILSSSPHLDALLGPPITRSSTTPDKAFQP
PTFQQSPLAQVSNSTPRQQPASPQQAQTLRQPQVEQPQPILSQSSPAQAASPHGSPGPTP
VFSSTPQALFTSPAPQTPPQLQPQPQTQLQASVQVQNQQQTRTTFSNPNSFTAGSPGTVS
QPVTSLSSSPPAVQPVAIQAQLQGLTTTSPLLTTSVSPSAQTITSHVQQLPVLLQPQFIK
AESLLLTTLKHDPCIVTTVASPTSLATTSPVQSTSLQAFMGGGTILTTVPVMVDTEKLPI
NRIAISGKPVGQPHKGEKRTAHNAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLRKA
IDYIRYLQQANQKLKQENMALKMSAQKNKSLKDLVAMEVDAPADVKNELPTPPASDVGSP
TSFSHCGSDSEPDSPMGEDTKPSVGVLNRPASGGSAGGMLDRSRMALCAFTFLFLSLNPL
AALLCSPDSSSAANTAATTTHSAGRSVLGIDIAADSWGWMDWMLPTLLVWLLNGILVSGV
LIRLLVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQ
LDLACAALWSLLRFCLQRLWVGRWLAARAGGLRSDRPLQEDACKSSRDAALVYHRLHQLH
MTGKLNGSHLSAVHMALSAVNLAECAGSCLPVASLAEVYVSAALRVKASLPRILHFTSRV
FLSSARQACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKDSIYSQAGNTVDPLAQ
VTQAFREHLLEKALYCVAQPHGEKSTSQGEGEYADALEYLQLLISASDAAGATSQSFAIG
SNMATVTGCDPHSKWWSSVAVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACL
NTFRAVRALLSKPENCQLSLSFSDKASALLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVM
RTNVWRLQQQGTTPVGTGSVGTSGSVGVHQASPPELQGFQQDLSSLRKLAHSFRPAMRRL
FLHEATARLMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYLP
PSFLSAPGQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctgtcgtttgacgatgcttctctggataatctggacccaacactgtcgctt
aatgaccccagcgacatcgacacggccctcttaagcgacattgatgacatgctccagctc
atcaacaaccaggacatggagtttgggggactctttgatcctccatacacagggcctgcc
cccacccaagagcttccccctctgacccagtccatcacctcagccgcccctccctccacc
actcctacacctccatctacatcatcctcctctatcctcagcagtagcccccacctggat
gctctcctgggccctcccatcacccgcagctccaccaccccagacaaggctttccagcca
cccaccttccagcagtcccccctggcccaggtatccaactccaccccgcggcagcaacca
gcctccccgcagcaggctcagaccctcagacagccccaggtggaacagccccagcccatt
ctcagccagtctagcccggcccaggcagcctcacctcatggatcaccaggaccgacccca
gtattcagctccacaccccaggccctcttcacttcccctgcaccacagactccgccccaa
cttcaaccccagccgcagacacagcttcaggcttcggttcaagttcagaaccagcagcag
actcggaccaccttcagcaatccgaacagcttcacagctggcagtccaggcacagtgagc
caaccagtcaccagcttgtcatcctcacctccagccgttcagccagtggccattcaggct
cagctccaagggctgaccacaacctctcctctactcacgacgtcagtaagcccatcggct
cagaccatcacatctcacgtacagcaactacctgtgttgctgcaaccccagttcatcaag
gctgaatctctgttgctgaccaccctgaagcatgacccctgcatagtcactacggtggcc
tctcccacctctttggccaccacttccccagtacagagcacttccctgcaggcctttatg
ggcgggggcaccatcctgactacggtgcctgtcatggtggacactgagaagctgccaatc
aaccgcatcgcaatcagtggtaaaccagtcggccagccacacaagggggagaagcgcaca
gctcacaatgcaattgagaagcgctaccgctcttccatcaatgacaaaatcatcgagctc
aaagacctggtggctggtacggaggccaagctcaacaagtctgcagtgctcaggaaagcc
atcgactacatccgttacctgcagcaggccaaccagaaactcaaacaggagaacatggct
cttaaaatgtcagcccagaaaaacaagtctctcaaggacctcgttgctatggaggtggat
gcaccggctgatgtgaagaacgagctgcccaccccaccagcctctgatgtgggctcgccc
acttctttctcacactgtggcagcgactcagagcctgacagtccaatgggggaggacacc
aagcccagtgtgggcgtgttgaacagaccagcatctggtggcagcgctggtggcatgttg
gaccgttcccgtatggcactatgtgccttcaccttcctcttcctctccctcaaccccctg
gctgccctgctgtgctcacctgacagcagctcagctgctaatactgcagccaccaccact
cattcagcaggcaggagcgttctgggcatagatattgcagctgactcatggggctggatg
gactggatgctgccaacgttactggtgtggctactgaacgggatcctggtgtcaggagtt
ctgatccgactgttggtttatggagagcctgtaaccagaccacactctggatcctctgtc
ttgttctggaggcaccgcaagcaggctgacctggacttagccagaggagattttgcccag
gctagtcagaacctgtggacctgtctgaaggctctcggtcgccccttacccacctcccag
ttagacctagcctgtgctgcactgtggtcccttctacgtttttgcctccagcgcctctgg
gtgggtcgctggctggctgccagagctggagggctgcgttctgaccgccccctgcaggag
gacgcctgcaaaagcagccgtgacgccgccctggtctaccatcgtctgcaccagctacac
atgacaggtaagctgaatgggagccacctgtcagcagtgcacatggctttgagtgcagtg
aacctggcagagtgtgctggctcctgtctgcctgttgcctctctggctgaagtctatgtc
tctgcagctctacgggtcaaagccagcctgccaaggatcctgcatttcacctctcgtgtg
ttcctgagcagtgcccgccaggcatgcctgtcatctagtggcagtgtgcctccggctatg
cagtggctctgtcacccacttggtcatcgcttctttgtggacggggattgggccattcgt
agcaccccaaaagatagcatctacagtcaggctggcaatactgtggatcctctggcccag
gtgacccaggccttcagagagcacctcctggagaaggctctgtactgtgtcgcccagcca
catggagagaaaagcaccagccagggagagggggagtacgctgatgccctggagtatctc
cagctgctgattagtgcatcggatgcagcgggtgccacctcacagtccttcgccatcggc
tccaacatggctactgtgactggttgcgacccccactccaagtggtggtcctctgttgcc
gtggtgatcatcaactggctccaaggagatgatgctgcagcggagagactgtatcccaca
gtggagcacctgcctcgcagtctacagaacgcagagagtcttctgccaaaggcgtgtctg
aacacattcagggctgtgcgggctctgctgtccaagccagaaaactgccagttgagtttg
agcttcagcgacaaggccagcgccctgctccgagacagcctcaacctaggaccacactgc
cacagctccagtttagacaaggttgtccagttgcttttgtgtgacctgttgttggtgatg
aggaccaatgtgtggcgtctgcagcagcaggggaccactcctgtggggacagggtcggtg
ggcaccagtggctctgtgggcgtccaccaggcctccccacctgagctccaaggttttcag
caagatctcagctccctacgcaagctggcacacagcttcaggcctgcaatgcgaagattg
ttccttcatgaagctacagccaggctgatggcgggggccagtcccacccgcacacaccag
ctcctggatcgctcgctgcgacgcagagcaacacccggagccaagacagaggagtgcgag
acacggccaggccagcgggagcaggcagaggccgtgatgctggcgtgccgctaccttccc
ccctccttcctctcggctcctggccagagggtgggcatgctggcagatgcagcccgcacc
ctggagaagctgggagacaagaggaccctccatgactgccagcaaatgatcatcaagctg
ggcagcggcaccaccgtcaccaacagctag
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integrated database retrieval system
