Scomber japonicus (chub mackerel): 128378353
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Entry
128378353 CDS
T09718
Symbol
hoxb5a
Name
(RefSeq) homeobox protein Hox-B5a
KO
K09305
homeobox protein HoxA/B/C5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128378353 (hoxb5a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128378353 (hoxb5a)
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Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
128378353
NCBI-ProteinID:
XP_053193816
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Position
18:4891937..4894539
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AA seq
318 aa
AA seq
DB search
MSSYFVNSFSGRYPNGPDYQLLNYGASSGAMNGGTYRDSSSATMHHATGSYGYSYNGMDL
TVTNRGGGSGGGVNNTGGHFGGGSVVGDSRGFASPAPERSLRQPSSCSLASAADSLLSPA
CGESKLGAQSSSPRSGQPGNGNLSSPNLSSNSSGAGGGGGGGGTAQRFTELDDASPEPDE
LQHNRDTGNPPTRTGHSQPGQKQEGGPAGSAAGSTAGSDGGTPQIFPWMRKLHISHDMTG
PDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKK
DNKLKSMSLGTGGNVFQP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttactttgtaaactcgttctcggggcgctacccaaatggccccgactatcaa
ctgctaaattatggagccagcagcggcgcaatgaacggcgggacgtacagggactcttcc
tccgccaccatgcaccatgcgacgggctcttacggctacagctacaatggcatggacctg
accgtcaccaaccgaggaggggggagcggcggcggagtcaacaacaccggaggacacttc
gggggaggctcggtggtcggggactcccggggtttcgcttccccggccccggagaggagc
ctcagacaaccatccagctgctccctcgcttccgcggcggattcccttctgtcacccgcg
tgtggagagagtaagctgggtgctcagagctcgtctccccgctcagggcaaccaggaaac
ggcaatctcagctctccaaatctgtcctctaactcctccggcgccggtggtggtggcggt
ggtggcggcacggcgcagcgtttcacggagttagacgacgcttcgccagagccggatgag
ttgcagcacaaccgggatacaggcaacccgccgaccaggaccgggcactcgcagcccggg
cagaaacaggagggcggcccggcgggatcagccgctggcagcacagcgggcagcgacggt
gggacaccacagatattcccctggatgagaaagctgcacattagccatgatatgactggc
ccggatgggaaacgggcacggacggcgtacacccgctaccagacgctggagctggagaaa
gagttccacttcaaccggtacctcacacggcggcgaaggatcgagatcgcgcacacgctc
tgcctcacggagaggcagatcaagatatggttccagaaccgcaggatgaaatggaagaag
gacaacaaactgaaaagtatgagtctcggcaccggcggcaacgttttccaaccgtag
DBGET
integrated database retrieval system