Scomber japonicus (chub mackerel): 128378398
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Entry
128378398 CDS
T09718
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128378398
04147 Exosome [BR:
sjo04147
]
128378398
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
128378398
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128378398
Exosomal proteins of other body fluids (saliva and urine)
128378398
Exosomal proteins of colorectal cancer cells
128378398
Exosomal proteins of melanoma cells
128378398
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Gene cluster
GFIT
Motif
Pfam:
Filament
BRE1
PHA_gran_rgn
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
128378398
NCBI-ProteinID:
XP_053193878
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Position
18:30271045..30277090
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AA seq
441 aa
AA seq
DB search
MTSFVSSSRSIRSSGGSMMGGSMMGGGGRMSMRAGSVYGGAGGSGVRISSASSGGMGMGM
GMGMGGGMCISGGGGGFGFGGGMSSSSFSVTGNEKFTMQNLNDRLASYMAKVSSLQTANA
ELEMKIRQFMENKVTYTARDYTSFFGVIGDITAKIEAAIRVNGAIHLSIDNARLAADDFR
AKYENEMTMRQSVEADIAGLKRVLAEMTLAKKDFTLQMEGLKEELLFLKNNHKEELVVMR
GQISGQVNVQVDAAPAEDLTRVMAEIREHYESITAKNQRELEAWFTTKSEALSKEVITQT
TSLQTSRSEVTEVKRTLQSLEIELQSMLGMKASLEGSLAETQSRYAMQLSSYQMQVTCLE
EQLAQLRADLERQGQEYKMLLDIKTRLEMEITEYRRLLDGEGSGSSSSSSMSTTTKRIVT
VTEKIGGISSSSSSSSSYMVR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctttgtctcttcatccagatccatcaggagctccggcggctccatgatgggc
ggctccatgatgggcggcggtggccgtatgtccatgagagccgggagtgtgtatggagga
gcaggaggatcaggtgttcgcatctcctcagcctcaagtggaggcatgggtatgggcatg
ggcatgggcatgggcggtggtatgtgcatcagtggcggcggcggtggctttggcttcggc
ggcggcatgtcttcctccagcttcagtgttaccggcaacgagaagttcaccatgcagaac
ctgaatgaccgtctggcctcctacatggccaaggtgtcatctctgcagacggccaacgcc
gagctggagatgaagatcaggcagttcatggagaacaaggtcacctacaccgccagagac
tacacctccttcttcggcgtcatcggtgacatcacagccaagatcgaggccgccatcagg
gtgaacggcgccatccacctcagcatcgacaacgctcgtctggccgcagatgacttcagg
gcaaagtacgagaacgagatgaccatgcgtcagtccgtggaggccgacatcgccgggctg
aagagggtcctcgccgaaatgactctggccaagaaggacttcaccctgcagatggagggt
ctgaaggaggagctgctcttcctcaagaacaaccacaaggaggagctggtggtgatgcgc
ggtcagatctccggtcaggtgaacgtgcaggtcgacgccgctccagcagaagacctcacc
agggtcatggctgaaatcagagaacactacgagtccatcacagccaagaaccagagagaa
ctggaggcctggttcaccaccaagtcagaggcgctgagcaaagaggtgatcacacagaca
accagcctgcagacatcgaggtcagaagtcacagaagtcaaacggacgctgcagtctctg
gagatcgagctccagtccatgttgggaatgaaagcatcgctggaaggaagtctagctgag
acacagagccgctacgccatgcagctctccagctaccagatgcaggtgacgtgcctagaa
gagcagctcgcccagctcagagccgacctggagcgtcagggacaagagtacaagatgctc
ctagacatcaagaccaggctggagatggagatcacagagtacaggaggctgctggacgga
gagggcagcggcagcagcagcagctcgtccatgtccaccacaaccaagcggatcgtcacg
gtgacagagaagatcggtggaatttcttcctcgtcttcgtcctcatcctcatacatggtg
cgctga
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