Scomber japonicus (chub mackerel): 128378399
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Entry
128378399 CDS
T09718
Name
(RefSeq) keratin, type I cytoskeletal 13-like isoform X1
KO
K07604
type I keratin, acidic
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128378399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128378399
04147 Exosome [BR:
sjo04147
]
128378399
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
128378399
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128378399
Exosomal proteins of other body fluids (saliva and urine)
128378399
Exosomal proteins of colorectal cancer cells
128378399
Exosomal proteins of melanoma cells
128378399
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
KIF21A
TPR_MLP1_2
BRE1
TBCA_PH
Tup_N
YabA
DUF1664
V-SNARE
Motif
Other DBs
NCBI-GeneID:
128378399
NCBI-ProteinID:
XP_053193879
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All DBs
Position
18:30197405..30201091
Genome browser
AA seq
413 aa
AA seq
DB search
MTSFSSRSSMRSSTLASSSSSSSRRASGMGGGSVYGGAGGSGVRVSRSSSAGGYNFDLGN
AVSNVDISISEKATMQNLNDRLATYLDKVRSLESANADLELKIRQFLEKRTKPELHNWDA
FNVRIKELQGQINFASRGNASLILAIDNAKLATDDFRVKYDTELAMRQAVEADIGGLKSV
LDDLTLARTDLEMQVEGLREELIQLKRNHEEDLVALRAQMSGQVNVEVDAAPQEDLATVM
AGIREHYETVANKNRKDLETWFQAKTAELNKEVAISTSTLQTTKSEIGEIRRTVQTLEIK
LQAQLSKKGALEATLAETKSRYAAMMAGYQRQVVALEEQLANLRSDLGRQKILFAELLDI
KTRLELEIAEYRRLLDGETESKLSTTTTTKTTRVVTIVQEVDSSGNVVSSSSS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttctccagccgcagcagcatgaggagctccaccttggcctcctcctcctcc
tcctcctcccgccgggccagcggcatgggaggcggcagcgtgtacggaggagccggagga
tccggagtccgcgtctccaggtcctcctccgccggcggctacaacttcgacctgggcaat
gcggtcagcaacgtggacatctccatcagtgagaaggccaccatgcagaacctgaacgac
cgcttggccacctacctggacaaggtgcgcagcctggagagcgccaacgccgacctggag
ctgaagatcagacagttcctggagaagagaaccaaacctgaactccacaactgggatgcc
ttcaacgtccgcatcaaagaactgcagggacagattaattttgcttctcgtggaaacgcc
tccctcatcctggccatcgacaacgccaagctcgccaccgatgacttcagagtcaagtac
gacacggagctggccatgcggcaggcggtggaggccgacatcggcgggctgaagtcagtc
ctggacgacctgaccctggccagaactgacctggagatgcaggtggagggtctgagagaa
gagctcatccagctgaagaggaaccatgaggaggacctggtggctctgcgagctcagatg
agcggccaggtgaacgtggaggtggacgccgctcctcaggaggatctggccaccgtcatg
gcgggaatcagagaacactacgagaccgtcgccaacaagaaccgcaaagacctggagacc
tggttccaggccaagacggccgagctgaacaaggaagtggcgatcagcacctcgactctg
cagacgaccaaatctgagatcggagagatccgacgaactgtccagactctggagatcaaa
ctgcaggctcagctcagcaagaaaggagctttggaggcgactctggcggagaccaagagc
cgctacgccgccatgatggccggctaccagaggcaggtggtggctctggaggaacagctg
gccaacctcaggtctgacctgggcagacagaagatcctgttcgccgagctgctggacatc
aagacccgactggagctggagatcgctgagtacaggagactgctggacggagagaccgag
agcaaactctccacgacaaccaccaccaaaaccacccgggtggtcaccatcgtgcaggaa
gtggactcgtctggaaacgtggtgagcagcagcagcagctaa
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