KEGG   Scomber japonicus (chub mackerel): 128378446
Entry
128378446         CDS       T09718                                 
Name
(RefSeq) thyroid hormone receptor alpha
  KO
K05547  thyroid hormone receptor alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04080  Neuroactive ligand-receptor interaction
sjo04081  Hormone signaling
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    128378446
   04081 Hormone signaling
    128378446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sjo03000]
    128378446
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sjo03310]
    128378446
Transcription factors [BR:sjo03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    128378446
Nuclear receptors [BR:sjo03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   128378446
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 128378446
NCBI-ProteinID: XP_053193939
LinkDB
Position
18:7100124..7135248
AA seq 416 aa
MEPLSNKQDSNSSEGDEKGWPDVPKRKRKNSQCSVKSMSALSVSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYEGCCIIDKITRNQCQLCRFKK
CIAVGMAMDLVLDESKRVAKRRLIEENREKRKREEMVRTLQVRPEPDSAEWELIRMVTDA
HRNTNAQGSSWKQKRKFLSDDIGQGPMMPTSDRDKVDLEAFSEFTKIMTPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVKREQLKNGGLGV
VSDAIFDLGKSLSQFNLDDSEVALMQAVLLMSSDRSGLTSVKKIEQCQEAYLLAFEHYIN
YRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggaaccactgtccaacaagcaggatagcaactcatcagagggagatgagaaagggtgg
ccagatgtgccaaagagaaagaggaagaacagccaatgttcggtgaagagtatgtctgct
cttagcgtctctgttccagggtacatccccagctacctggagaaggatgagccatgtgtg
gtgtgtggggacaaggcgactggctaccactaccgctgcatcacctgcgagggttgcaag
ggtttcttccgcaggaccatccagaagaacctccatccagcttactcttgtaaatatgag
ggctgctgcatcattgacaaaatcacccgcaaccagtgccagctgtgccgctttaaaaag
tgcatcgctgtgggcatggccatggacttggtgctggacgagtcgaagcgcgtggccaag
cggcgtctcatcgaggagaatagagaaaaaaggaagagggaggagatggtgcggacgctg
caggtgaggccggagccggacagtgcggagtgggagctgatcaggatggtaaccgatgcc
caccgaaacaccaacgcccagggctccagctggaaacagaagcgcaagtttttgtcagat
gatattgggcagggtccaatgatgcccacttctgacagagacaaggtcgacctggaagcc
ttcagtgaattcaccaagatcatgacccccgccatcacacgcgttgtcgactttgccaag
aaactacccatgttctctgagctgccatgtgaagaccagataatcttgctgaagggctgc
tgcatggagatcatgtcgctgcgcgccgccgtacgctacgacccggagagcgagacactc
acgctaaacggcgagatggcggtgaagcgcgagcagctgaaaaacggagggctgggcgtg
gtgtcggacgccatcttcgatttgggcaagagcctctcccagtttaacctggacgactcg
gaggtggcgctgatgcaggccgtgctgctcatgagttcagaccgctcagggttgaccagc
gtgaagaagatcgagcagtgtcaagaggcctacctgctggcgttcgagcactacatcaac
taccgcaagcacaacattccccacttctggcccaagctgctgatgaaggtgacagacctg
cgtatgatcggagcttgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gaactctttcccccgctcttcctagaggtcttcgaggaccaggaagtgtga

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