Scomber japonicus (chub mackerel): 128378467
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Entry
128378467 CDS
T09718
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
sjo04517
IgSF CAM signaling
sjo04530
Tight junction
sjo04810
Regulation of actin cytoskeleton
sjo05100
Bacterial invasion of epithelial cells
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128378467 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128378467 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
128378467 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128378467 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128378467 (zgc:86896)
05100 Bacterial invasion of epithelial cells
128378467 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378467 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128378467 (zgc:86896)
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Arp2/3 complex
128378467 (zgc:86896)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128378467 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Rax2
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
DPPIV_N
SH3_3
Motif
Other DBs
NCBI-GeneID:
128378467
NCBI-ProteinID:
XP_053193971
LinkDB
All DBs
Position
18:2674182..2682220
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQVAVSPNNNVVNIYEKKGKEWVKIHELTEHSGRITGVDW
APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSVRSTVLSLDWHPNNILLAAGSADLHCRVFSAYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSIAVADAAQKKEVTQL
STDRLPLLSVLYVSPTEIVAAGHDCCPYQYTYKGPGALEFVKKLDIPKQTTKGSMSAMQH
FRNLDKKATDEDSNELNTLHQNSITQLCVVSGETAKVEKYSSVGLDGAMVIWEFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctacagttttggcctggagccgctctcctgccacgcctggaacaaagacagg
acacaggttgcagtgagtcccaacaacaatgtggtgaacatctatgagaagaaaggcaaa
gagtgggtcaagatccatgaactgactgagcacagtggacgaatcacaggcgttgactgg
gccccagagtccaaccgcattgtgacatgtgcctctgaccgcaacgcctatgtgtggact
ctgaaggatggcgtgtggaagcctaccctggtcctggtgcgcatcaaccgtgctgccacc
tgtgtgaagtggtcaccactagagaacaagtttgccctgggcagcggagctcgcctcatc
tctgtctgctattttgagaaggagaatgactggtggctgagtaagcacatcaagaagtct
gttcgctccacagtcctgagtttggactggcatcccaacaacatcctgcttgcagcaggg
tctgcagacctccactgtagggtcttctcagcctatataaaggacattgaggacaagcct
ggacccactgcctggggggctaagatgccttttggggaggtgctgctagagcataaggac
tgtggaggttgggtgcacagtgtttctttctcccccagtggagaccagctggcctgggtg
gcccacaacagcagcatcgctgtggctgatgctgcccagaagaaggaggtaacccagctg
tccactgaccgcctgccactgcttagcgtcctgtatgtcagccccactgagattgttgct
gcgggtcatgactgttgtccctaccagtacacttataaaggtccaggtgctctggagttt
gtaaagaaactggacatccccaagcagaccaccaagggaagcatgtcagccatgcaacat
ttccgcaacctggacaagaaagccactgacgaggacagcaacgagctgaacacccttcac
cagaacagcatcacgcagctgtgtgttgtgtcaggggaaacagccaaagtggagaagtat
agcagtgtgggtctggatggagccatggtgatctgggaatttaagcactga
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