KEGG   Scomber japonicus (chub mackerel): 128378498
Entry
128378498         CDS       T09718                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04010  MAPK signaling pathway
sjo04145  Phagosome
sjo04148  Efferocytosis
sjo04310  Wnt signaling pathway
sjo04370  VEGF signaling pathway
sjo04510  Focal adhesion
sjo04520  Adherens junction
sjo04530  Tight junction
sjo04620  Toll-like receptor signaling pathway
sjo04810  Regulation of actin cytoskeleton
sjo05100  Bacterial invasion of epithelial cells
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128378498
   04310 Wnt signaling pathway
    128378498
   04370 VEGF signaling pathway
    128378498
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128378498
   04148 Efferocytosis
    128378498
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128378498
   04520 Adherens junction
    128378498
   04530 Tight junction
    128378498
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128378498
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128378498
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128378498
   05100 Bacterial invasion of epithelial cells
    128378498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128378498
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128378498
   04031 GTP-binding proteins [BR:sjo04031]
    128378498
Membrane trafficking [BR:sjo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    128378498
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    128378498
  Macropinocytosis
   Ras GTPases
    128378498
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    128378498
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128378498
  Exosomal proteins of other body fluids (saliva and urine)
   128378498
  Exosomal proteins of colorectal cancer cells
   128378498
  Exosomal proteins of bladder cancer cells
   128378498
GTP-binding proteins [BR:sjo04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    128378498
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 128378498
NCBI-ProteinID: XP_053194019
LinkDB
Position
18:16056661..16062653
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTMEKLKEKKLSPITYPQGLAMAKEIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKKGKKCSLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccataaagtgtgtcgttgtcggggacggagctgtgggtaagacctgcctgctc
atcagctacaccaccaatgcctttccaggagagtacatccccacagtgttcgacaactac
tccgccaatgttatggtggatgggaagccagtgaatctgggcctttgggatacggcagga
caggaagactacgacagactccgcccactttcctacccacagacggatgtgtttctcatc
tgcttttcgcttgtgagtccggcctcgtttgaaaacgtccgtgccaagtggtaccctgag
gtgagacaccattgtcccaacactcccatcatccttgtgggcaccaagttggatctgaga
gatgacaaggacactatggagaagctgaaggagaagaaactctctccgatcacctatccc
caaggcctggcgatggccaaagagattggctccgtgaagtacctagagtgctcagccctg
actcaacgtggccttaaaactgtgttcgacgaggccatccgggccgtcctctgccctcca
cccgtgaagaagaaggggaagaagtgtagtctcctctaa

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