Scomber japonicus (chub mackerel): 128378498
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Entry
128378498 CDS
T09718
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04145
Phagosome
sjo04148
Efferocytosis
sjo04310
Wnt signaling pathway
sjo04370
VEGF signaling pathway
sjo04510
Focal adhesion
sjo04520
Adherens junction
sjo04530
Tight junction
sjo04620
Toll-like receptor signaling pathway
sjo04810
Regulation of actin cytoskeleton
sjo05100
Bacterial invasion of epithelial cells
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128378498
04310 Wnt signaling pathway
128378498
04370 VEGF signaling pathway
128378498
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128378498
04148 Efferocytosis
128378498
09144 Cellular community - eukaryotes
04510 Focal adhesion
128378498
04520 Adherens junction
128378498
04530 Tight junction
128378498
09142 Cell motility
04810 Regulation of actin cytoskeleton
128378498
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128378498
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128378498
05100 Bacterial invasion of epithelial cells
128378498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378498
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128378498
04031 GTP-binding proteins [BR:
sjo04031
]
128378498
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
128378498
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
128378498
Macropinocytosis
Ras GTPases
128378498
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
128378498
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128378498
Exosomal proteins of other body fluids (saliva and urine)
128378498
Exosomal proteins of colorectal cancer cells
128378498
Exosomal proteins of bladder cancer cells
128378498
GTP-binding proteins [BR:
sjo04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
128378498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
128378498
NCBI-ProteinID:
XP_053194019
LinkDB
All DBs
Position
18:16056661..16062653
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTMEKLKEKKLSPITYPQGLAMAKEIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKKGKKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccataaagtgtgtcgttgtcggggacggagctgtgggtaagacctgcctgctc
atcagctacaccaccaatgcctttccaggagagtacatccccacagtgttcgacaactac
tccgccaatgttatggtggatgggaagccagtgaatctgggcctttgggatacggcagga
caggaagactacgacagactccgcccactttcctacccacagacggatgtgtttctcatc
tgcttttcgcttgtgagtccggcctcgtttgaaaacgtccgtgccaagtggtaccctgag
gtgagacaccattgtcccaacactcccatcatccttgtgggcaccaagttggatctgaga
gatgacaaggacactatggagaagctgaaggagaagaaactctctccgatcacctatccc
caaggcctggcgatggccaaagagattggctccgtgaagtacctagagtgctcagccctg
actcaacgtggccttaaaactgtgttcgacgaggccatccgggccgtcctctgccctcca
cccgtgaagaagaaggggaagaagtgtagtctcctctaa
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