Scomber japonicus (chub mackerel): 128378508
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Entry
128378508 CDS
T09718
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00260
Glycine, serine and threonine metabolism
sjo00630
Glyoxylate and dicarboxylate metabolism
sjo00670
One carbon pool by folate
sjo01100
Metabolic pathways
sjo01200
Carbon metabolism
sjo01230
Biosynthesis of amino acids
sjo01240
Biosynthesis of cofactors
sjo04981
Folate transport and metabolism
Module
sjo_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128378508 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128378508 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128378508 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128378508 (shmt1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128378508 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
128378508
NCBI-ProteinID:
XP_053194030
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Position
18:10515037..10520268
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AA seq
482 aa
AA seq
DB search
MSLTNGNSVSKETWESHNKMMLEPLANNDSEVFSIIKKEKHRQKYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAFGLDSEKWGVNVQPYSGS
PANFAVYAGIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENAKLFHPKLIIAGTSCYSRNIDYARMKQIANENGAYLMGDMAHISGLVAAGVV
PSPFEYCDIVTTTTHKTLRGCRSGVIFYRKGVRSVDAKGKETPYNLESLINQSVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQLQVLANCKALSSALIDHGYKIVTGGSDNHLILLD
LRNKGSDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVEQDFKKVA
EFIHRAIELTLEVQRSLDPKAPLREFTQALSQGEKFQQRVAEIKAEVETFAGTFAMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacaaacggcaacagtgtgagcaaagaaacatgggagtcgcacaacaagatg
atgttggagcctctggccaacaacgactctgaggtgttctccatcatcaagaaagagaag
cacaggcagaagtacggtctggagctgatagcgtccgagaactttgccagcagagctgtt
cttgaggctttgggttcctgtatgaacaacaagtactctgaaggataccctggacagagg
tactatggtggtacagagcatgttgacgaactggagagactctgccagaagagggcgctg
gaggcctttggtctggattcagagaaatggggtgtcaatgtgcagccatactcaggttcg
ccggccaactttgccgtctatgccggcattgtggagccccacggcaggatcatgggactg
gaccttcctgacggaggtcacctgacacatggctttatgactgaaaagaagaaaatctca
gcgacgtcaatcttctttgagtccatgccttataaggttaatccagaaactggctacatt
gactatgacagactgcaagaaaacgcaaagctgttccacccaaaactcatcattgcagga
acgagctgctattcccgcaacattgactacgcccgcatgaagcagatcgctaatgagaac
ggtgcatatctgatgggagacatggctcacatcagtggattggtggcagctggagttgtg
ccctcgcccttcgagtactgtgacattgttaccacgacaacgcacaagacgcttcggggc
tgccgatctggagttatattctacaggaaaggtgtgcggagcgtggatgcaaagggaaag
gagactccgtacaacttggagtctttgatcaatcagtcagtgtttcctgggctgcaggga
gggccacacaaccacgccatcgcaggtgttgctgtagctctcaaacaggccatgacacca
gagttcaaggcctaccagttgcaggttctggcaaactgcaaagctctgtccagtgccctc
attgaccatggttacaagattgtcactggcggctctgacaaccatctgatcctgctggac
ctgcgtaacaaaggaagtgatggaggacgagctgagaaggttctggaggcctgtgctatt
gcttgtaataagaacacctgtccaggggataagagtgctttgcgccccagtggtctgaga
tttggctctccagctctgacctccagaggtttggtggaacaagatttcaagaaagtggca
gagttcattcacagagccatcgagctgaccttggaggtgcagagaagcctggatcccaaa
gcccctctgagggagttcactcaggctctttcccagggagagaagttccagcagcgggta
gctgagatcaaggcagaggtggagactttcgctggtactttcgccatgcctggcctgcct
gagctgtag
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