Scomber japonicus (chub mackerel): 128378513
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Entry
128378513 CDS
T09718
Symbol
arhgap23a
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378513 (arhgap23a)
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Others
Others
128378513 (arhgap23a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
128378513 (arhgap23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
YceD
Motif
Other DBs
NCBI-GeneID:
128378513
NCBI-ProteinID:
XP_053194037
LinkDB
All DBs
Position
18:complement(18190403..18260056)
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AA seq
1786 aa
AA seq
DB search
MNGVAFCLVGIPPYSENHAKGRRDGLSSAGDNPRPPMAARPGREGGGMGWKGPRTLVLHK
NSQGFGFTLRHFIVYPPESALHTNLKDEENGNGKGYQKGRLEPMDTIFVKNVREKGPAHQ
AGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLVSAYSQDAYL
TGNEPFSGGAENLPPPPPLCYPRTKTTSPAGAPPSAPMGQNQLDNWSRWAGSSSPSSPLD
NRSAVGSPASWQEGRAGEPGGVGHSSPAHRTEEIQYGMTSQQPQGQTRGRSYSSSSSSGG
PLSSPLQVHYPNHHAASSSQAQPRKSSSAWTSPPLPQLSHGRTERCQQALSDWYYSQLPE
RSGRSMQTRHRSYSQDRLSETRRQQQRTGGWPHSASQDTLLLLQQSGPGPQGDPYWSYGD
WEGGPGRGQPASNYTRTRSENLLAQYDRHGRSLEMLDRAAAGLVSPRFERPSWHQAPQPP
PRTDTYSRQGSHYGAAQAPPMSRHTQSHSKHHPQTHSQAHSQSHTQAHSQPQQSAPQSRR
LPPGQSMDDQPVGYRSYSPSFYRKTGRIMQQAHSFRDPSYSGPHLNWNPAPKTSPPEGTP
APLTTSTASPLASTSPESQDRAYRPTNHERERGSVEGQTEVVAQTQEVVMRQKPPTGRRN
AHGMRHPHYALPMDGLEPSLFSPDPQDSAPGPGSSGDRAPRKPNGNLAPLPIEDDSLASI
PYIDEPTSPGADLRARHVPASSVVSSGMNSAPAVVTSPASPTFTFPLTRLFSHDCSSIKS
SRRSSYLLAITTERSKSCDEGLNTFREEGRVFSRLPKRVKSFFTDGSLDNLGTAEEVRSK
RHSTSELGNITYSDVRQEGWLHFKQILTEKGKKVGSGMRPWKRVFSVLRSHSLFLYKDKR
EAVLRGATIGGGAEDEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDML
DWIKVIRENSKTDNEELGFSRQALINKKLNDYRKQSPTSSKPDSSPRLPRMKPPFLHTKT
ENAAGAPRSPKPDGKDESSPPKSPWGINIMKKTKKAGPKAFGVRLEECQPGANNKFIPMI
VEICCGLVEEMGLEYTGIYRVPGNNAMVSMLQDQLNKGVDINPAEEKWQDLNVVSSLLKS
FFRKLPEPLFTNDKYNDFIDANRMESASDRLKTMKKLIRDLPDYYYHTLKFLVCHLKTVA
DNSDKNKMEPRNLALVFGPTLVRTSEDNMKDMVTHMPDRYKIVETLIQHYIWFFNEEPDK
DEKTPVDTEDVQPAPNIDHLLSNIGRTALLGEASDSTNSDSAKSKGSWGSKKDLTAKDFL
TLSIMSAVTGRKRRKRHNGRRVGSSTDDDSEHEPIKAGHLGAEEEEEAESPVGDTAPRAE
GEEDDDEEEEEEEEEEDEEVVESRVKEEVEEEVVAVIPSRPCCKEEEEAGGRQAAMLLQE
EEARAEVKGPQWRAPEDARSIVSGYSTLSTLGRSLGSEGRGDDADDEHSELVSETDNESG
FASRSLTQERPDKHPTTPVNTQQPPAAAPRSFLYTHYKPHTLSPTNLLAPPTPLTHTPDS
AERSEGGARSTTPSSSSFSSSSTTHKLHSRPSFNSHKLIQCDTLARKKLKGEKAKARSLD
LLELSEAAAQGDRAGPEGAPRVRRDTSRTNPSSGSSQESLRLSRPKPALPPSEAASFTPT
GPGSRSLAEQVRARLLGSADDLRSVGLRKPLSPETRRKRRAWRRHTVVASPTEASEKRPP
MTLTEFPLSPITQNQVKTPGLPRDADGHEQGPATHQAPTSRFHQYL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttgctttttgccttgttggaataccaccctactctgagaaccacgctaag
gggcggagggatggtctctcttcagccggtgacaaccctcggccgccgatggcggccagg
ccgggaagggagggaggcggcatgggctggaagggtccccggacgctggttctccataag
aactcccagggttttggtttcacactacgccacttcattgtttatcctccagagtccgcc
ctgcacaccaacctcaaggatgaggagaatggtaatggaaaggggtatcagaaaggtcga
ctggagcctatggacaccatatttgtaaagaatgtgagagaaaagggtccggcccaccaa
gcgggcttgtgcacaggggatcggttggtgaaagtgaacggagaaagtgttttaggaaag
acgtactcccaggtgatcgccctcattcaaaacagtgagagtgtgctggagctctccatt
atgccaaaagatgaagatgtgcttcagttggtaagtgcatactcccaggatgcctacctg
actggcaacgaacccttctcagggggagctgagaatctcccgccgccacctcccctctgt
taccctcgtaccaagactacgtcccccgctggagcccctccgtctgcccccatgggccag
aaccagctggataactggagtcgctgggcaggttcttcaagcccctcttcacccttggac
aaccgctctgcagtgggcagccccgccagctggcaggaggggcgagcaggagagccaggc
ggtgtgggtcacagcagccccgcccaccgcacagaggagatccagtacggtatgaccagc
cagcagcctcagggccagaccagggggcgctcctactcttcctcttcctcgtcaggaggc
cctttgtccagcccgctgcaagtccactaccccaaccaccatgctgccagctcctcacag
gcccagccacgcaagtccagctcagcctggactagtcccccactgccccagctcagccac
ggccgcactgagcgctgccagcaggccctctctgactggtactacagccagctgcccgag
cgctcaggacgcagcatgcagacccgccaccgcagctactctcaggaccggctcagcgag
acaaggaggcagcagcagcgtacaggtggctggccacacagcgcctcccaggacaccctt
ctattactacagcagtcaggaccggggccccaaggagacccctactggtcatatggagac
tgggaggggggtccaggtcggggccaacctgcttctaactatacccgaactcgctctgaa
aacctgctggctcagtatgatcgccacggccgctcattagagatgctggaccgagcagca
gctggactggtctcgcctcggtttgagaggccctcgtggcaccaggctccccagccaccc
cccaggactgacacctattcaaggcaggggagccattacggtgccgcgcaagctcctccg
atgtcccgacacacacagtcacactctaaacaccatccccagactcactcccaggcccac
tcgcagtcccacacccaggcccactcccagccccagcagtccgcccctcagagcaggcgg
cttcctcctgggcaaagtatggacgaccagccggtgggctaccgcagctacagtccctca
ttttaccgtaagacgggccgaatcatgcagcaggcgcactcattcagggacccttcgtat
tctggcccccacttgaactggaacccagcacctaaaaccagcccaccagagggaacccca
gcacctctcaccacctccaccgcgtccccgctggcctccacctcacccgaatcccaggac
agagcgtacaggcccacaaaccacgagagggaacgggggtcagtggaggggcagacagag
gtggtggcacagacccaggaagtggtaatgagacagaaaccccccaccgggcggaggaac
gcccatggcatgcgtcatccccactatgcgctgcccatggacgggctagaaccctcatta
ttttccccagatccccaggactcagcccccggtcccggctcgtcaggagacagagcccca
cgtaaaccaaacggcaacctcgcccccctccccatagaggatgattccctggcctccatc
ccctatatagatgagccgaccagccccggcgctgacttgcgtgcccgccatgtgccggcg
tcctccgtggtgtccagcggcatgaattcggcgcctgccgtggtcaccagccccgcctcc
cccaccttcaccttccccctcactaggctcttctcacacgactgcagcagtattaaatcc
agtcgccgttcctcctatcttctagccatcaccacagagcgctccaagtcatgcgacgaa
ggactcaacacgttcagagaggaagggcgagtcttctcgaggctaccaaagagagtcaag
agtttcttcacagatgggtctctggacaaccttgggacagcagaggaggttcgctccaaa
cgccactccacctcagagctgggaaacatcacctacagcgacgtacggcaagaaggatgg
ttgcacttcaaacaaatcctcacagaaaagggcaagaaggtgggcagcggcatgcgtccg
tggaagcgagtcttttcagtacttcgctcccattcactgttcctctacaaggacaagagg
gaggcggtgcttcgaggggccaccattggagggggggctgaggacgagcagccgatcagc
atccggggctgcctggtggacattgcgtacagtgagaccaagcgcaagcacgccctgcgg
ctgaccacccaggacttctgcgagtacctgctgcaggcggaggaccgggaggacatgctg
gactggataaaagtcatcagggagaacagcaagacggataacgaggagcttggcttttcc
agacaggcgctcatcaataagaagctgaatgattacaggaaacaaagtccaacaagtagt
aaacccgactcgtctcccaggctgccccgtatgaagcctcccttcctgcacaccaaaaca
gagaatgctgccggggcgcctcgctcccccaaaccagacggcaaagatgagagcagccct
ccaaagtctccgtggggaattaacatcatgaagaagacaaagaaagccgggcctaaagct
ttcggtgtgaggttggaggaatgtcaaccgggtgctaataacaagttcatcccgatgatc
gtggagatctgctgtggtttggtggaggagatgggtctggagtacacgggaatctaccgg
gtgcccgggaacaacgccatggtgtcgatgcttcaggaccagctcaacaagggcgtcgac
atcaaccctgcggaggagaagtggcaggacctcaacgtcgttagcagtttactcaaatcc
ttcttccgcaaacttcccgagcccctttttaccaacgacaaatacaatgacttcattgac
gccaatcggatggagagtgcatcagacagactaaagaccatgaagaaactgattcgagac
cttccagattattattaccacactctgaagttcttggtttgtcacctgaagactgtagca
gataactcagataaaaacaagatggagcctcgtaacctggccctggtgttcgggccgacc
ttggttcggacatccgaggacaacatgaaagacatggtcacacacatgcccgaccgatac
aagatagtagaaacgctcatccaacattacatttggtttttcaacgaagagccagacaaa
gatgaaaagacgccggtggacacagaggatgtgcagcccgcccccaacatcgatcacctg
ctgtccaacatcggcaggaccgctctgctcggagaggcctcagactcaaccaacagtgac
tcagcgaaatcaaaggggtcatgggggtcaaagaaagacctcacagcgaaggacttcctg
actctgtccatcatgtcagctgtaacgggccgcaaacgcaggaagcgccataacggtcgc
cgtgtgggcagcagcaccgacgacgactcagagcacgagccaatcaaagccggacatcta
ggggcggaggaggaagaggaggcagaatcacctgttggtgacactgctcctcgagcagag
ggagaggaggatgacgatgaagaggaggaagaggaagaggaggaagaagatgaggaagtt
gtagaaagccgagtgaaagaggaggtagaagaagaggtggtggcggttattcccagtcga
ccatgctgtaaagaggaagaggaggcaggaggaaggcaggcagccatgctgctgcaagag
gaggaggcgcgggcggaggtgaaggggccgcagtggcgagctccagaggatgcacgctct
attgtttctggttactctaccctctccacgttggggaggagcctggggtcagaggggagg
ggggacgatgctgatgacgagcacagcgagctggtgagcgagacggacaatgagagcggc
ttcgcctcacgctccctcactcaggaaagacccgacaaacacccaactacacctgtgaac
acacaacaaccgccagcagcagccccacgcagctttctttacacacactacaaaccccac
actctctcacccacaaaccttctcgccccgcccacacccctcacacacacaccagactct
gcggagaggagtgaaggaggggcgcgatccaccacgccctcgtcatcctccttctcctcc
tcctccactactcacaaactgcactcgcggccttcctttaactcccataagctgatccag
tgtgacactctggccagaaagaagctgaagggggagaaggccaaggctcgctccctggac
ctgttggagttgtctgaggccgcggcacagggcgacagggccgggccagagggtgcgccc
agagtgaggagggacacctccagaaccaacccctcctcaggcagcagccaggagagcctt
cgtctgtcccggcccaagccagccctgcctcccagcgaggccgcctccttcactccgacc
ggcccgggcagcaggtctctggcagagcaggttcgcgctcgactgctgggctcggccgac
gacctgcgcagcgtgggactgcgaaaaccgctgtcgcccgagacgcggaggaagagacga
gcctggcgcagacacaccgtggtggcctccccgactgaggcatccgaaaaaagaccccca
atgactctcactgagttccccctgtctcccatcactcaaaatcaggtcaaaacaccaggg
ctgcctcgagatgcagacgggcacgaacaaggaccggctacacatcaagcacccacctca
agatttcaccagtacctgtga
DBGET
integrated database retrieval system
