KEGG   Scomber japonicus (chub mackerel): 128378565
Entry
128378565         CDS       T09718                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04137  Mitophagy - animal
sjo04144  Endocytosis
sjo04145  Phagosome
sjo04148  Efferocytosis
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128378565 (rab5c)
   04145 Phagosome
    128378565 (rab5c)
   04137 Mitophagy - animal
    128378565 (rab5c)
   04148 Efferocytosis
    128378565 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128378565 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128378565 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128378565 (rab5c)
   04031 GTP-binding proteins [BR:sjo04031]
    128378565 (rab5c)
Membrane trafficking [BR:sjo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128378565 (rab5c)
 Endosome - Lysosome transport
    128378565 (rab5c)
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128378565 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   128378565 (rab5c)
  Exosomal proteins of colorectal cancer cells
   128378565 (rab5c)
  Exosomal proteins of bladder cancer cells
   128378565 (rab5c)
GTP-binding proteins [BR:sjo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128378565 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 128378565
NCBI-ProteinID: XP_053194103
LinkDB
Position
18:complement(19158859..19170551)
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQGRSGQCCGSGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggcggaccagcacggaccaacggcactgcagcgagcaacaagatctgc
cagtttaagttagtgctgttgggggagtcggcggtggggaaatccagcttggtgctgcgc
tttgtaaaaggccagtttcacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgatacaacagtcaaatttgagatctgggacactgcaggacag
gaacggtatcacagcttggcacccatgtactacaggggagcccaggcagccattgtggtc
tacgatatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccaaacattgttattgcactggcagggaacaaagcagacctggccaac
aagagagctgtagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggagacttcagccaagactgctatgaatgttaatgagatttttatggctatagccaag
aagcttcctaagaacgagcctcagggtggagctggagctggtggacgagccagaggcggc
gtggacctgcaggaagccgcaccacagggcagaagcggccagtgctgcgggagcgggaac
taa

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