Scomber japonicus (chub mackerel): 128378592
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Entry
128378592 CDS
T09718
Name
(RefSeq) uncharacterized protein LOC128378592
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128378592
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128378592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128378592
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
SR proteins
128378592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_8
RRM_5
HALZ
Motif
Other DBs
NCBI-GeneID:
128378592
NCBI-ProteinID:
XP_053194135
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All DBs
Position
18:complement(28929636..28933220)
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AA seq
316 aa
AA seq
DB search
MSRPPPDINDMTSLKVNNLPYRTSPETLRQVFEKYGRVGDVHIPRDPCTRENRGFAFVRF
HLKQDAEQALDGMDGTVLEGRELRVEMAHVDGIKVDTLTSLKVDNLTYRTSPDTLRVMFE
MYGRVGDVHIPRDPYTKESKGFAFVRFHHKRDAEDAMDAMDGAMMDGRELRVQMAHGGGG
GGGRRGGQIRRSGGHDRKNRRSEHLAPSCGSRSSSVADEAAGPSWLLWNEGRSLQLPDPL
SPSLPKRRKLMDPLGVEDDGTGLHNTDITTVQPPRTAKSLVLLESLAMLAAENDILREEN
EKLKRQLEKQRQTFFL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacctccgccggatattaacgacatgacttccctcaaagtgaacaacctcccc
taccggacgtctcccgaaacactcaggcaggtgttcgagaagtacggtcgtgtaggggac
gtgcacatccccagagacccctgtacgagggagaaccggggctttgcattcgtgcgtttc
cacctcaagcaggacgcagagcaggctttggacgggatggatggcaccgtgctggaggga
cgggagctccgggtggagatggcgcacgtcgatggcatcaaagtggacactctcacctcc
ctcaaagtggacaacctgacctaccgcacatctccagacacgctcagagtcatgtttgag
atgtacggccgggtcggggacgtgcacatccccagagacccctacaccaaggagagcaaa
ggcttcgcgtttgtgcgttttcaccacaagcgggacgcagaggacgcgatggatgcgatg
gatggagcgatgatggacggacgggagctgcgggttcagatggcccatggaggaggagga
ggaggcggccggcggggaggacagatccggaggtctggaggacatgaccgcaaaaacagg
aggagtgaacatctggctccgagctgcggctccaggtcgagcagcgtggccgacgaagcc
gccggaccgtcgtggttgctctggaacgaggggcggtctctccagctccccgaccccctc
agcccctcgcttcctaaacggaggaaactaatggacccgctcggcgttgaggacgacggg
acgggtctacacaacaccgacatcacgaccgtgcagccgcctcgcaccgccaagagtctg
gtgctgctggagagcctcgccatgctcgccgcggagaacgacatcctgagagaggagaac
gagaaactgaaaagacagttagagaaacagaggcagacgttcttcctttag
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