Scomber japonicus (chub mackerel): 128378666
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Entry
128378666 CDS
T09718
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128378666 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128378666 (usp43b)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128378666 (usp43b)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128378666 (usp43b)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128378666 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
BILBO1_N
Motif
Other DBs
NCBI-GeneID:
128378666
NCBI-ProteinID:
XP_053194205
LinkDB
All DBs
Position
18:9111805..9176017
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AA seq
1223 aa
AA seq
DB search
MERQSRVKEEMPTSKEEKRKEKKPKSGKLFRKKSLKSVGSFMNRIIKTLGTFTHFGDADA
QDAEDDDGGFRNGAPCTLSASSGIIKEDVQVAWDRVAKTTQSTSSSLCTGREKLLYQYGD
KIPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLERYKLDLIETRINGLLKSDEMRFA
KGEVTEKLASLVRAMWTLEYTPQLSVDFKTIVSKYGSQFRGNSQHDALEFLLWLLDRVHE
DVSLASHNNNNKTKPPGKGPGGAEEVLSPDPTQSQQQPSIQHSFVQEHFQAQYKSSLTCP
HCLKQSNTFDPFLCISLPIPLRQTRPLCVTLVFSTKGQRFLRVGLAVPLFGSMACLRRMV
ADEGKISPDQVILTEVYSTGFQRSFFDEEDLTSIAENDVIYAFQAPPLYIRGGSARISGY
HHSLPSSPYSSGPEGQRLPASGTLSSEFLNQGVPVKILLLVCNAAGAGQQTVRFGPPFLM
REDRSISWDQLQQSILSKLYYLMINGAQAQNTRVLFNIRVVGGSAFYSYLSPQDGRPLYH
PAVDRALKLCGSGGPPHVKLIIEWEYRIKDCLFGNIQEEVVKDAESVRNQQQQHVQQYSC
TLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRN
KLTTFVHFPMAGLDMTPHMVNRNHGTHQPSLQPGWKQSRRPDLTPPDFFYDLYAVCNHHG
GMHGGHYTAFCRNSVDGQWYSYDDSSAEPVPEGEVCTRGAYILFYQRRNNIPPWSASSSV
TGSTSSSTSDHWLVRLTGGSKRDSLVSAEPITGPPGSTQAPESPELPVFGDEPPKTVDIN
GFQAKPFVRGTQGRSVSMRSPTKPKETLSKVLPLRWSFGSKDRIKHPAQTQPGELVEYLE
SGRRPRCTKDPIIKLVATPPQRNAQGRAFEVGQDCSSPSGSSLSCTDKLSSDTCYSPKIP
EGQSRRFAEKSISSNVQGRDDSSLRQRSSKRSRQDQGRTLDLQLQRGTILGGHISHSAPP
SRDSTLRRAKVQTGGSSRAQKDLLQTVLQPEDRRGQKGQEGRSHESLLSFFKTGFMKKDI
QRSPIKGQERRTNGHGQLGKLACSNLAKMSLSNGTLTTVALEDKRANITPNCDSQNGKVQ
LVNGKGGSHEPVDIKRAHSSSNIQTKLDLTFRRCASLQRNGDIAAHPAHRILLSDRPSYA
TLQRTRYSTTSLGRHRPVPWSCF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggagagacagagcagagtcaaggaagaaatgccgacatcgaaggaggagaagcgcaaa
gagaagaagccgaaatctgggaagcttttccgaaagaaatcgttgaagtctgtggggagt
tttatgaacagaatcattaaaactttgggcactttcacccactttggagacgctgacgcg
caggacgcagaggacgacgatggggggtttcggaatggcgcaccttgcaccctcagcgcc
agctcaggaattatcaaagaggatgtacaggtggcgtgggatcgggtggcgaaaaccacg
cagagcacgtcttcatctctgtgcaccggcagagagaaactactttaccaatacggagac
aaaatcccaggtgttcttgggttgaaaaaccacgggaacacgtgtttcatgaacgcagtg
gtccagtgtttgagcaacacagacctgctcgcggagtacctggggctggagcggtacaag
ctggacctgattgagaccagaataaacgggctgctgaaaagtgatgagatgaggtttgcc
aagggagaagtcactgagaagttggcatcacttgtcagggctatgtggactctggagtac
accccgcagctgtctgtggacttcaagactatagtgtccaagtatggatcccagttccgt
ggtaattcccaacacgacgccctggagttcctcctgtggctgctggaccgcgtccatgaa
gacgtcagcctcgcctctcacaacaacaacaacaagaccaaacctcctggaaagggcccc
ggtggagctgaggaggtgctgtctcctgacccgacccagtcccaacagcagcccagtatc
cagcacagctttgtccaggaacacttccaggcacagtacaaatcttcgctgacatgcccg
cactgcctgaaacagagcaacacctttgacccattcctctgcatctcgctcccaattcct
cttcgccagaccaggccgctgtgtgtgactctggtgttcagcaccaaaggacagaggttt
ctgcgagtcgggctggctgtgcctctgtttggctccatggcctgtctgaggaggatggtg
gctgacgaggggaaaatttccccagaccaggtgatcctgacagaggtttactccacaggg
ttccagcgctccttctttgatgaagaggatctaaccagtatagctgagaatgatgtcatc
tacgccttccaggctccacccctctacatcagagggggctctgcacgcatctcaggttac
catcacagcctgccatcctctccatactccagtggtcctgagggtcaaaggttacctgca
tctgggacactgtcttcagagttcctcaaccagggcgtccctgtaaagattctactgttg
gtgtgcaacgctgcaggagcaggccaacaaactgttaggtttggaccaccattcctgatg
agagaggaccggtctatttcctgggaccagctgcagcagagcatcctcagcaagctttat
tacctgatgatcaatggagcgcaggcacagaacaccagagtgctgttcaacatccgtgtg
gtgggaggatcggcattttacagctacctgtcgcctcaggacggccggccactctaccac
cctgctgtcgacagagctctgaagctctgcggctcaggaggacctccacacgtgaagctc
atcatcgagtgggagtacagaatcaaagactgtctgttcggtaacattcaggaggaggtg
gtgaaggatgcagagagtgtgagaaatcagcagcagcagcacgtccagcagtacagctgt
actttggacgagtgtttccagctctacaccaaagaggaacagcttgccccagatgacgcc
tggaagtgccctcactgtaagcagctgcagcagggtatggttaagatgagcttgtggacg
ctgccagacatcctcatcctccacctgaagcgcttcaggcaggtgggcgagcggaggaac
aagctcacgacgttcgtacatttccccatggcgggtctggatatgacccctcacatggtg
aaccgcaaccacggcacccatcagccctccctccagccgggctggaaacaatcccggcga
cccgacctgactcctcctgacttcttttacgatctgtatgcagtgtgcaaccaccacgga
ggaatgcacggcggacattacacagccttctgtaggaactcagtggacggccagtggtac
agctatgatgacagcagtgctgagccggttccagagggggaggtgtgcacacgaggagcg
tacatcctcttctatcagagaagaaacaacatccccccttggtctgccagctcctcagtc
actggttccaccagctcatccacctctgatcactggctggtccggctgacagggggcagt
aagagagacagcctggtgtcagcagaaccaatcactggacccccaggctccacacaggcc
ccagagtcccctgagctgccagtgtttggggacgaaccccccaaaacagtagacataaat
ggatttcaagccaagccgtttgttcgtggcactcaaggcagaagtgtgagcatgagatca
ccaacaaagcccaaagagactttgagcaaagttttgccactgcggtggtcctttggctcc
aaggaccgcattaaacacccagcccagacccagcctggagagctggtggagtatctggag
tccgggcgcaggccacgatgtaccaaagaccctatcataaaactggtggccaccccacca
cagaggaatgcccagggaagagcctttgaagtaggacaggactgcagctcaccaagtggt
agcagcctcagttgtacagacaaactcagctcggacacttgttactcccccaaaatacca
gagggacagagcagacgatttgcggagaagagcatcagcagcaatgtccaaggcagggat
gacagttctctgaggcagaggtcatctaagagatctaggcaggaccagggcaggaccctg
gacctgcagctccagagagggactattctaggaggtcatatcagccacagtgcacctcca
agcagagactccacactgagaagagccaaggtgcagacaggggggagttccagggcacaa
aaagacctgctacagacggtccttcaacccgaggacaggaggggtcaaaagggtcaggag
ggcaggagccacgaaagtctcttgtcatttttcaaaactggtttcatgaaaaaagacatt
cagaggtcaccaatcaaggggcaggagaggcgtacgaacggccacggacaactgggaaag
ctagcgtgcagtaatttggccaaaatgtccctttctaatggcacgcttaccacagtagca
ctagaggataagagggccaacatcacccccaactgcgacagccaaaacggcaaagtgcag
ctggtgaacggaaagggcggcagtcacgagcctgtagacattaagcgtgcacacagctcc
agcaacatccagactaagctggatttgacgtttcgtaggtgtgcgtctctacagaggaac
ggcgatatcgcggcccatccagcccaccgcatcctgctgtcagacaggcccagctacgcc
actctgcagcggacacgatacagtaccacctccctgggtaggcacagacctgtcccctgg
tcctgtttttga
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integrated database retrieval system
