Scomber japonicus (chub mackerel): 128378685
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Entry
128378685 CDS
T09718
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00330
Arginine and proline metabolism
sjo00480
Glutathione metabolism
sjo01100
Metabolic pathways
sjo04148
Efferocytosis
Module
sjo_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
128378685
09106 Metabolism of other amino acids
00480 Glutathione metabolism
128378685
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128378685
Enzymes [BR:
sjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
128378685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
128378685
NCBI-ProteinID:
XP_053194228
LinkDB
All DBs
Position
18:6532532..6536309
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AA seq
415 aa
AA seq
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MEKNTCHEKGKTINDFLDAKIEERESTGNDLPFYVANLDVVFKRHLLWLTHLPRVKTFFA
VKCNNSPAVIQMLRALDTGFDCASKGEIQLALSLGVTPDKIIYAHTTKPRTHIKYARAHG
VNLMTFDNEIELLKISQYHPKAKLVLRIAVDDSKSLLRLNAKFGARLDTIEMLLERAEQL
DLEIIGVSFHVGSGCTDSSAFKQAISDARHVFDLANSMGFQMRLLDIGGGFSLTGNCKAV
FTEFAETINGALDEFFPPDCGVEIMAEPGRYYVESAFTLAACVNAKRVDIDPMANHYNGE
KNSSVKMVYYINDGVYGSLNCLINDPAHTSVTPYLHKAVDGSEQRYQSVIWGPTCDSLDK
IIENFWIPELEVGDWLLVDDMGAYSISILTDFNCFERAQICPVLTAETWYALNLF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaatacatgccatgaaaaaggaaagacaattaatgatttcctcgacgccaaa
atcgaagaacgtgaatcaacgggcaatgatctacccttctacgtggcaaatctagatgtt
gtgtttaagagacaccttttgtggcttactcacttacctcgtgtcaagactttctttgca
gtgaaatgcaacaactcaccagcagttatccagatgctaagagctctggacacaggtttt
gactgtgccagcaagggtgagattcagttggccctgtccctcggagtgacaccggataaa
atcatttacgcacatacaaccaaaccacgtacccacatcaaatatgcccgcgctcacgga
gtcaatctgatgacttttgataatgagattgagctcctaaaaatttctcaatatcatccc
aaagccaaactagtgctccgcatcgcagtggatgattccaaatcgctgttaagactcaat
gcaaagtttggagccagactggataccattgaaatgctgctggaacgagctgaacaactg
gacttagagatcattggagtcagcttccatgtagggagcgggtgcactgacagttcagca
ttcaaacaggccatatcagatgcccgacatgtgtttgacctagcaaattcgatgggattc
caaatgagactcttggacattggtggaggattctctttgactgggaactgtaaagcagta
tttacagagtttgcagaaaccattaatggagcactggatgaattcttcccgcctgactgt
ggggtggagattatggcagaaccaggccgatactacgtagaatcagccttcacgctggca
gcgtgcgtcaatgccaaaagagtcgacatagatccaatggccaaccactacaatggtgag
aaaaacagctctgtaaaaatggtctactacattaatgatggagtgtatggctccttgaat
tgcctcatcaatgatcctgcccacaccagtgttacaccatatcttcacaaggctgttgat
ggcagcgagcagcgataccagtccgtcatttggggtccaacctgcgacagccttgacaaa
ataattgaaaacttctggattcctgagctggaagtgggggactggcttcttgtcgatgac
atgggtgcttactctataagtatactcactgacttcaactgctttgaacgtgcacagatt
tgtcctgttttgacagcagagacatggtatgccttaaaccttttctga
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