Scomber japonicus (chub mackerel): 128378748
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Entry
128378748 CDS
T09718
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128378748 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128378748 (nup85)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128378748 (nup85)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128378748 (nup85)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128378748 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
128378748
NCBI-ProteinID:
XP_053194308
LinkDB
All DBs
Position
18:14779460..14787558
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AA seq
651 aa
AA seq
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MEEVDVEPAVTNIPSASAVKHLGFAWGPGDILVYETLYKRSGASQPGYPFIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIKEDLPSKNKKPQFVSISKNYRSVIRACMEELRQVAVSS
KDAEEAMQSGNQVSILLAIELIWNLCEVLFIEAAPAGSLLLHLLDWVRLHKPVDEKTREV
LQSESPAEHHDYWDVVLGYVLQGRLEEARQMLMKQATLQPAARSMFKLMDTLLSKMPFYD
PSGTQTLTEFDVKWRHWHEEVDRCLQDNSFASNQHLELICKILVGDEDTLLEHKELLSTW
YHFLVTRLLFCHPTVKPVELHYYAQSCMTMFLDPRSVPEPLDSILLAAFEFDIHQVIKDC
SIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDYF
DHCPEFGRVYLELQIERVPLDTERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNRLG
SALSWSIRAKDAAFATLISEKFLQDYCNRGTFSDLDLIDNLGPAMLLSDRLTFLGKYREF
HKLYGEKHFGEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSAEQTHELMFCL
EELTSSLNTTTPGTDRPMQEEDIEVTKVELLRLALARNLAMAIVKEGTVEA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagacgtcgagccggcagtgaccaatattccttcagccagtgctgtgaag
catttaggatttgcgtggggtccaggtgatatccttgtgtatgagaccctttacaaaaga
tcaggtgcttcacaaccaggttatccattcatccacgaggtcagaaaagatgaggacata
tattcccccattttacgcaaactcttcaatgagtcacatcacatctttgttggcctgcag
acaattaaagaggacctccccagcaaaaacaagaaacctcaatttgtcagcatcagtaaa
aactacagatctgtgattcgagcctgtatggaggagcttcggcaagttgcagtttcttca
aaagatgctgaggaggccatgcagtctggaaatcaggtgtccattctgttggccatagaa
ctgatctggaatctgtgtgaagtgctgttcatcgaggctgctcctgcgggttccctgttg
ctccacctcctggattgggtgaggttacataagcctgtggacgagaagaccagagaggtg
ctgcagagtgagagccctgctgagcaccacgactactgggatgtggttctgggttatgtg
ctgcagggcaggttggaagaagccagacagatgctgatgaagcaggccaccctacagcct
gccgccaggagcatgttcaagctgatggacaccctgctcagcaagatgcccttctacgac
cctagtggcacgcagacgctgacagagtttgatgtgaagtggagacactggcatgaggaa
gtggaccgctgtcttcaggacaactctttcgccagcaaccaacacctggagctcatctgc
aagatcctagtgggtgatgaagacactttgctggagcacaaagagctgctgagcacctgg
taccacttcctggtcactagactgctcttctgccaccctacagtcaaacctgtagagcta
cattactacgcacagtcatgcatgaccatgtttctggacccgaggagcgtcccagagccc
ctggacagcatcttattggctgcctttgagtttgacattcaccaggtcatcaaagactgc
agcatcgctctcaacaactggtggtttgtggcccatttgacagatctcttggatcactgt
aaactcctccagtcccacaatctacactttggctccaacttgagagagtttctgctgtta
gaatatgcttctggtctcttcactcatcacagtttgtggcagttggctgttgactacttt
gaccactgcccagagtttggccgtgtctacctggagctgcagatcgaacgggttccttta
gacacagagcgcaaagccctcaaggtgctcaggatctgtgagcaaagacaaatgtcagag
caagtgcggagtatctgtaagatcatggctatgcgggctctgaggaacaacagactcggc
tctgctctctcttggagcatcagggccaaagatgctgccttcgccaccctcatttcagag
aagttcttacaggattactgcaacagagggactttctctgatctggacctgatagacaac
ttgggcccagccatgctgctcagtgacaggctcactttcctcgggaagtatcgtgagttc
cacaagttgtacggagagaagcatttcggggaggcggctaagctgctgctctcactcatg
acggccaagatcgccccccgaagcttctggatgaccctgctgaccgacgctctgccgctg
ctggagcagaaagaggtgatcttttctgcagaacaaacccatgagctaatgttttgttta
gaagagctcacttcctccctaaacaccaccactcctggcacagacaggcccatgcaggag
gaagacatagaggtgaccaaagtggagctcctgagactggctctggccaggaatctggct
atggctatagtcaaagaaggcacagtggaagcatga
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