Scomber japonicus (chub mackerel): 128378795
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Entry
128378795 CDS
T09718
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03420
Nucleotide excision repair
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128378795 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
128378795 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sjo03051
]
128378795 (rad23aa)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128378795 (rad23aa)
Proteasome [BR:
sjo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
128378795 (rad23aa)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128378795 (rad23aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
128378795
NCBI-ProteinID:
XP_053194378
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Position
18:7749427..7756514
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AA seq
365 aa
AA seq
DB search
MQITLKTLQQQTIQVEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPAAAASPPVSEAPKPPVQDSGSTSTAVPATTPASAPAATPAA
VPIPPEEAKEEPSAAATEPQQPASSSGAGQGLDASSALVTGAEYEAMLTEIMSMGYERER
VVAALRASFNNPHRAVEYLLTGIPSSPVQETNPPVQAPASGPTEAPSLAEGENPLAFLRT
QPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGDAPEV
GELGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQ
GLEDD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctaaaaacactgcagcagcagacaattcaagtggagatagaccccgaa
caaacggtgaaggccttgaaagagaagatagaagcagagagaggaaaagacaactttcct
gtatctgggcaaaagctcatatatgcagggaaaatcctgcaagatgacacaccgattaag
gactacaaaatcgatgagaagaattttgttgtagtgatggtgtccaaggctaagcctgca
gcagccgcctcgcctcctgtctcagaagcacccaagccccctgtacaggactctggctcc
acgtcaacagctgtcccggccacaaccccagcttcagcccccgccgcaacccccgcagct
gtccccattccccccgaggaggccaaagaggagcccagcgccgcagccacagaaccacaa
caaccagccagctccagtggtgcgggtcagggcttggatgcctcttcagcgttggtgact
ggagccgagtacgaggcgatgctgacagagatcatgtccatgggttacgagagggagaga
gtggtggcagcactacgggccagtttcaacaacccccacagagctgtggagtaccttctc
actggtatccccagcagcccggtccaggagactaatcccccggtgcaggcccccgcatct
ggacccacagaagctccatctctagcagaaggagagaaccctctggcattcctgcggacc
cagccccagtttctgcacatgagacaggccatccagcagaaccccgctctgctaccagct
ctcctccagcagctaggcagggagaaccctcaacttttacagcaaatcagtcagcatcag
gagctcttcatccagatgctgaacgagccagtaggagaggggggagacgcgccggaggtc
ggagagctgggggcggcaggggaggagggcgcgcccgtcaactacatccaggtcacacct
caggagaaggaagccatcgaaaggttaaaagcgttgggtttccctgaggctctggtgatc
caggcctactttgcctgcgagaagaacgagaacctggcggccaactttctcctcaaccag
ggactggaagacgactga
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