Scomber japonicus (chub mackerel): 128378879
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Entry
128378879 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128378879
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128378879
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
128378879
NCBI-ProteinID:
XP_053194430
LinkDB
All DBs
Position
2:complement(269181..316557)
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AA seq
1075 aa
AA seq
DB search
MDQCEDREEGVPPSKSSLCGEHDSQTKAQRMQQQRADSPEPSCVSMKSDRSKGGLVKFKD
GQPADGRVQQQSSEVPSDQSAQQHQTQLNSIFMLLEENILTFVKKELKRVQRGLSPGDPE
CLESQSEDEEVLDGEEEEQRRSSRKAFLKITVHFLRRMKQEELAERLQSRACAAKCRRKL
KSNLQKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEVRQIETASRKPDRP
ETTIRHEDIFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFT
FRELNVVKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEIL
TDVTESTSVDVLLTNLIRGNLLSSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEE
YFRKRFRDEERARTIISHIKTSRSIHIMCHIPVFCWITATVLEDVLKSRKRRELPKTLTE
MYIHFLVVQSKLKKVKYDGGAETDPHWSKKSRKMIKSLGKLAFEQLQKGNLIFYESDLTE
CGIDIRAASVYSGVFTQVFKEERGLYQDKVFCFIHLSLQEFLAALHVHLTFIKSGVNLVA
GKQTSRWSKVFKDKPEPTRFYRSAVDKALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLT
QTGSSSQTKQKTVEYIKKKMSENVSAERSINLFHCLNELNDCSLVEEIQQYLRSGSLSTD
KLSPAQWSALVFVLLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLTDCHLSERS
CAALSSVLSSQSSSLRDLDLSHNELQDSGVKQLSAGLESPHCGLETLSLSGCLITEEGCA
SLASALSANPSHLRELDLSYNHPGDSGEKILSAGLEDPHWRLDTLRMDHGGLQRLKPGLR
KYACELELDPNTMNRNLKLSDNNRTVTLVEKVQSYPDHPDRFDWWPQLLCRNVLTGRCYW
EVEWTDNVYISVSYRRINRKGNSEDCVFGWNDQSWSLECSDDDGRYSAWHNKNRTYISSS
SSVSGRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLCAGFTVWSGSVSL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagaggatgcagcagcagagagcagactctcctgaa
cccagctgtgtgtccatgaagagtgaccggtctaagggtggtcttgttaagtttaaagat
ggacaacctgctgatggaagagttcagcagcagagctcagaggttcccagtgatcagtct
gcacagcagcatcaaacacagctgaactctatatttatgctgctggaggagaacatcctc
acttttgtgaagaaggagttgaagagagtccagaggggtctgagtccaggtgacccagaa
tgcttagagagtcagagtgaggatgaggaggtgttggacggtgaggaggaagagcagagg
aggagcagcagaaaggcatttctgaagatcacagtgcacttcctgaggagaatgaagcag
gaggagctggctgagcgtctgcagagcagagcttgtgctgcaaagtgtcgacgtaaactc
aagtctaacctgcagaagaagttccagtgtctgtttgaggggatcgctaaagcaggaaac
ccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgcagag
gtcaatgatgaacacgaggtcagacagattgaaacagcatccaggaaaccagacagacca
gaaacaacaatcagacatgaagacatctttaaagcctcacctggaagagatgaaccaatc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattcact
ttcagagagctgaatgtggtgaaagagaaaaagtacagcttggtggaacttgttcatcac
ttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttc
atctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctg
actgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcaggggaaac
ctgctttcctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgagtgtgtcggcatggtgacagaggtcagagggttcactgacccacagaaggaggag
tacttcaggaagagattcagagatgaggagcgggccagaaccatcatctcccacatcaag
acatcacgaagcatccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctggaggatgtgttgaaaagcagaaagagaagagagctgcccaagaccctgactgag
atgtacatccacttcctggtggttcagtccaaactgaagaaggtcaagtatgatggagga
gctgagacagatccacactggagtaaaaagagcaggaagatgattaagtctctgggaaaa
ctggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtctttaaa
gaggagagagggctgtaccaggacaaggtgttctgcttcatccatctgagccttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaatctggtggca
ggaaaacaaacatccaggtggtctaaagtcttcaaagacaaacctgaaccaacacgtttc
taccggagtgctgtggacaaggccttaaagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgctgaca
cagacaggaagtagctcacagaccaaacagaaaacagtggagtacatcaagaagaagatg
agtgagaatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaat
gattgttctctagtggaggagatccaacagtacctgagatcaggaagtctctccacagat
aaactgtctcctgctcagtggtcagctctggtcttcgtcttactgtcatcagaaaaagat
ctggatgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgagactgctg
ccagtggtcaaagcctccaacaaagctctactgactgactgtcacctctccgagagaagc
tgtgcagctctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctg
agtcacaacgaactgcaggattcaggagtgaagcagctttctgctggactggagagtcca
cactgcggactggaaactctcagtctgtcaggatgtctgatcacagaggaaggctgtgct
tctctggcctcagctctgagtgccaacccctcccatctgagagagctggacctgagctat
aatcatccaggagactcaggagagaagatcctgtctgctggactggaggatccacactgg
agactggacactctcaggatggaccatggtggactgcagagactgaaacctggtctgagg
aagtatgcctgtgaactggaactggatccaaacacaatgaacagaaacctcaaactgtct
gataacaacaggacggtgacacttgtggagaaggttcaatcatatcctgatcatccagac
agatttgactggtggcctcagctgctgtgtagaaatgttctgactggtcgctgttactgg
gaggtcgagtggacagataacgtttatatatcagtgagttacagaagaatcaacaggaaa
ggaaacagtgaagactgtgtgtttggatggaatgatcagtcctggagtctggagtgctct
gatgatgatggtcgttactctgcctggcacaataagaacagaacatacatctcctcctcc
tcctctgtctctggcagagtagcagtgtatgtggactgtcctgctggcactctgtccttc
tacagagtctcctctgacacactgatccacctccacaccttcaacaccacattcactgaa
cctctgtgtgctgggtttacagtctggtctggttctgtgtctctgtag
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integrated database retrieval system
