Scomber japonicus (chub mackerel): 128378895
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Entry
128378895 CDS
T09718
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM16-like
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128378895
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128378895
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128378895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
128378895
NCBI-ProteinID:
XP_053194446
LinkDB
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Position
18:23456847..23459848
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AA seq
499 aa
AA seq
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METISNSQEENLNVKEEPRDPTSQASDTLLPQDVLCDSCMDSPSKALKSCLTCLVSYCEG
HLRPHLENAKFQNHRLVDALHDIDSRACEVHQFPLERFCLMDGCCVCLDCESQEHKGHTT
ATVEEARTQIETELEKTQVEISQSALEAEKAIGKLQSNNDLIKSSVQEVCVIVEQQFSIL
QTAVEEAKKGVVEVLEGEQKQALRQAEGIQAHLQQRNTELAKTLAQINKLCKHKSDVNFL
QEYSEWRKGEADVCLPSVYINRMDHLTSYVQVVTDATQELCDLILSCYREKLSEICRSGT
TSQMPDHSSLPDPETPEDFLKYTRTLTFDPDTTHQFLRVKEDNRKLINTSPWQHSYPNHP
DRFEYWRQAITSESLYLGRHYIEVELSGEGAHVGVTYKSIDRKGEQSASCITGNDFSWCI
GRSSRGFSVWHAGVETLLEASDITKIGLYVDFQRGSVSFYDVTGPMRLLHKYRGDFIEPL
YVTAWLSKKDNVVSLVHIK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagactataagcaatagccaagaagagaacttgaatgtaaaggaggagccgagggat
cccaccagccaagcgtctgacacactgctcccacaagatgtattatgtgactcctgcatg
gatagccccagtaaggccctaaaatcatgcctgacctgtctggtttcctactgcgagggt
catctcagacctcatctggagaacgccaagtttcaaaaccatcgactggtggacgccctc
catgacattgacagtcgggcttgtgaggttcatcaatttccccttgaacgcttctgtctg
atggatggctgctgtgtgtgtctggactgcgaaagccaggagcataaaggtcacacaaca
gcaactgtggaggaggcacgcactcagattgagactgaactggagaaaacgcaagtagag
atcagtcagagtgccttagaagctgagaaagcaattggaaaactgcagagcaacaatgac
ttaattaagtcttcggtgcaggaggtttgcgtcattgttgaacagcagttcagtatactg
cagacagccgtggaagaggcaaagaaaggggtggtggaggtgctggagggtgagcagaag
caggctctcagacaggcagagggcatacaggcacatctgcagcagaggaatacagagttg
gcaaagactctggcccaaataaacaagctgtgcaaacacaagtctgatgtcaactttctg
caggagtactcagaatggaggaaaggagaggcagatgtgtgtttgccaagtgtgtatatc
aaccgcatggaccatctgacctcttacgttcaagtagtgactgatgctacccaggagctg
tgtgacctgattctctcatgctacagggaaaaactgagtgagatttgcagaagtggtact
acatcccagatgccagaccattcttcgctgcctgatcctgagaccccagaggacttttta
aaatacacaaggactttgacctttgacccagacactactcatcagtttctacgtgtaaaa
gaggacaacagaaagctgatcaacaccagcccctggcagcacagctacccaaaccaccct
gatcgctttgagtattggcgccaggcaataacttcagagagcctttacctggggagacac
tacattgaagttgagcttagtggggaaggtgcacatgtaggagtcacatacaagagcatt
gatcgtaagggagagcaaagtgccagctgcatcaccgggaatgacttttcttggtgcata
gggaggagcagccgaggtttctccgtctggcatgctggtgtggagacacttttagaagcc
tctgatatcacaaaaattggcttatatgttgactttcaacgaggctccgtgtctttctat
gatgtaactggtcccatgaggctgctccacaagtacaggggtgatttcatagagcccttg
tatgttactgcctggctgtcaaagaaggacaatgtagtttctctggttcatataaaatga
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