Scomber japonicus (chub mackerel): 128378898
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Entry
128378898 CDS
T09718
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04136
Autophagy - other
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128378898 (wipi2)
04136 Autophagy - other
128378898 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378898 (wipi2)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128378898 (wipi2)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128378898 (wipi2)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128378898 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_TEP1_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
128378898
NCBI-ProteinID:
XP_053194450
LinkDB
All DBs
Position
18:complement(10747288..10754070)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLASQSGDAGGSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQKEKYVPAEEPTTWGGYLGKVLMASTTYLPSQVTEMFTQ
GRAFATVRLPFCGHKNICALAVIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHRLD
GSAEPANEILEQGSHDRPLVAQTYSAAVTKGYCEEQGAVGGAGLEDDLNDLRLEEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggccagtcaaagcggggacgccggcggaagccagctcctcttcgccaacttt
aaccaggacaacacgtccttagctgttggcaccaaatcaggatacaagtttttctccctg
tcctctgtggataaattggagcagatatatgaatgtactgacacagaggatgtgtgcatt
gtggagcgtctgttctccagcagcctggtagcaatcgtcagcctgaaggctcccaggaag
cttaaagtctgtcacttcaagaagggaactgagatctgcaactactcctattccaacacc
atactggctgtcaaactcaacagacagaggctgatcgtgtgtctggaggagtcgctgtac
attcacaacatccgagatatgaaagtgctgcacactatcagagagactccacccaaccct
tcaggactgtgtgccctttccatcagcaatgataactgttacctggcgtaccccggcagt
gccacgataggagaagtccaggtgtttgacacggtcaacctgcgagcagctaatatgatt
ccagcccacgacagcccattagcggctctggcatttgatgccagtggaaccaaactggcc
acagcctcagagaagggcacagtcatccgtgtcttctcaatcccagagggacagaaactc
tttgagtttcggcgaggagtcaagaggtgtgtgagtatctgttcgttggcgttcagtatg
gaaggcctgtacctttcggcctccagcaacacagagacggtccacatcttcaaattagag
acgcagaaggagaagtatgtgccggcagaggagcccaccacatggggagggtacttgggc
aaggtcctaatggcgtccaccacctacctgccttcacaagtgacagaaatgttcacccag
gggcgagccttcgccaccgtacgtctgcccttctgtggacataagaacatctgcgcctta
gctgtgatccagaagattcccaggttgttggtagcagcggctgatggctacctgtatctg
tacaacctggatccacaagagggaggggaatgcacacttatgaaacagcacaggttagat
ggcagtgctgagccagccaatgagatccttgagcaagggtcacacgatcgccctcttgtg
gcccaaacctacagtgccgctgtcactaaaggttactgcgaagagcagggcgcagtggga
ggggcgggcctagaagacgacctcaacgacttacgtttagaggaggagaacgagcaacca
ccactcatccttgaaactgactga
DBGET
integrated database retrieval system
