Scomber japonicus (chub mackerel): 128378911
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Entry
128378911 CDS
T09718
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128378911 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128378911 (lrrc4ba)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
NGL family
128378911 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128378911
NCBI-ProteinID:
XP_053194466
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All DBs
Position
18:25068679..25074160
Genome browser
AA seq
736 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPPLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGNEESALVAINETTIRVHPGP
TPSGHLWSEGFPTTASSLSASWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QTGSSGLGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMSLGMGTGTGMGLNN
NNNPSPCSQNMSISCSQVPTSTTGGTPSGGTLPSPVPLPLPQLGLHSSLKGLMGKGQNEP
LLFKSGSKENVQETQI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcatcctcttgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacttg
gaggaggttcccgaaagcatatcagtcaacacacgatacctcaacctgcaagagaactca
atacaggttatcaagtcagacactttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtaggagcgttcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggaactgtggctgcgcaacaaccctattgagactttgccaggctatgcc
ttccaccgagtgccctcgctgcgtcgcctggaccttggtgagctcaagaagttggatttc
atctctgacgcagcctttgtgggcctcatcaatctacggtacctgaacctgggcatgtgt
gggctgaaggacattcccaaactgactgctcttgtgcgtttggaggagctggagctgtca
ggaaaccggctggagatcatccgacccggttctttccagggcttggtgtctctccgcaag
ctgtggctcatgcattcacaggtgtccgtcattgagcgcaacgcctttgacgacctgaaa
aacctggaggagctcaacctgtctcataactctctacactccttgccccatgacctcttc
acaccccttcaccagctggaaagggtgcaccttaaccacaacccctgggtctgcaactgt
gatgtgctttggcttagttggtggctgaaagagacggtgcccagcaacaccacctgctgc
gcccgttgccatgctcccccacccttaaagggaaagtacatcggagagcttgaccagagc
cacttcacctgctatgcgccagtcatcgtcgagccacctacagacctcaatgtcacggag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
acccccaacggcactctcatgacccacggctcctaccgggtgcggatatccgtcctgcat
gatggcacactcaacttcacgaatgtcaccctgcgagacacgggccagtacacctgcatg
gtcaccaatgcagctggcaataccacggcaaccgctgtcctcaatgtcaccgctgctgat
gccagcgtcaactacacctactttacaacagtcactgtggaaacagttgagacgccggga
aatgaagaatctgcattagttgccatcaatgagaccaccattcgtgttcatcctggtccg
actccctcaggccacctgtggtcggaaggttttcctaccacagcctcttctctgtcagcc
agctggtcctcctcctctccgcgggccacccgacccaccttcactgtgcccatcacggaa
ccgggcttctcaggcctggatgatgtgatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagcagtgatgctggtggtgttctacaagctaaggaagcaa
caccagctgcataaacaccacggccccgcccgtgccatcgagatcatcaatgtggaggat
gagctgggtgccggggccagtggtcggggcagcggtatctcaggaggctccaccgtgacg
cagactggaagcagtggattaggagggggccagagcctcaggttgcaccacccagagata
gtcaacctgccgaacctggcccgatcggagcacctcaaccactactacaaaacccatcat
ttcaacaacaacatgatgagtttgggcatgggcacgggtactggtatgggcctcaacaac
aacaacaacccctcgccttgctctcagaacatgtccatatcatgttcccaggttccaacg
tccaccactgggggtacgccctcgggtggcacccttccctcccctgtgcccctgcccctg
ccccagttgggtctccacagttctctgaaaggcctaatgggtaaagggcagaatgagcca
ctgctttttaaaagcggctccaaagaaaatgtgcaagagactcaaatctga
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