Scomber japonicus (chub mackerel): 128378922
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Entry
128378922 CDS
T09718
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128378922 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128378922 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128378922 (coro1a)
04147 Exosome [BR:
sjo04147
]
128378922 (coro1a)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Coronins
128378922 (coro1a)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128378922 (coro1a)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128378922 (coro1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
Trimer_CC
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDCP
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_RFWD3
NBCH_WD40
BLOC1_2
WD_LRWD1
NagJ_C
MAD
DUF7310
bZIP_1
DivIC
TolA_bind_tri
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
128378922
NCBI-ProteinID:
XP_053194482
LinkDB
All DBs
Position
18:24703971..24714205
Genome browser
AA seq
456 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQALKADQCYDDIRISQMTWDSNFCTVNPKFVAMIVDASGGGAFM
VLPLSKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDAGLTTSL
TEPVVKLEGHSKRVGILCWHPTAHNVLMSAGCDNVVILWNVARGEAAVRIDTVHTDVIYS
ACWNRDGSQILTACKDKTMRLLDPRKGTVIAEKEKPHEGSRPIRAVFVSDGKILTTGFSR
MSERQVALWDPKNFGEPLTLQELDTSSGVLLPFYDPDTGVVFLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTVGPEPSVEADDWFDGKEAPPILISLKDGFTTTTKAKEFKVLKSLMKTTTASAGS
HQDSSGEVQSLKKEVKDLKAAIEELTKRVSELESKH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggttgtgaggaccagtaagttccgtcacgtctttggtcaggctctgaaa
gctgaccaatgctatgatgacatccgaatctcccagatgacatgggacagcaatttctgc
actgtaaaccccaagtttgtggccatgatcgtggacgccagcggaggaggagccttcatg
gtgttgcccctgagcaagacaggacgtatcgacatgtcctatccgactgtgtgtggccac
acaggaccggtcctggacattgagttttgtcctcacaacgacaacatcattgccagcggc
tctgaggactgcagtgtcatgatttgggagatcccggatgctggactgaccacatcactc
acagaacctgttgtcaagctggagggccactccaaacgtgtcggcatcctgtgctggcac
cccaccgcccacaatgtgctgatgagtgcaggctgcgataacgtggtgatcctgtggaac
gtggcccgtggcgaggcagcagtgaggatcgacaccgtgcacactgatgtcatctacagt
gcctgctggaacagggacggctcccagatcctcaccgcctgcaaggacaagaccatgcgg
ttgctggaccctcgcaagggcactgtcatcgctgagaaggaaaagcctcatgagggctcc
aggcctatcagggcggtgttcgtgtccgacgggaagatcctgactaccggcttcagtcgc
atgagtgagagacaggtggcgctatgggacccgaagaacttcggagagcctctgaccctg
caggaactggacaccagcagtggcgtccttctgccattctatgacccagacacaggcgtc
gtcttcctctgtggcaagggggacagcagtatccgttactttgaggtgacagatgaagct
ccgtatgtccactacctgtccatgtacagcagcaaggagagccagaaggggatggggtac
atgcccaagaggggcctggaggtcaacaaatgtgaaatcgccaggttctacaaactccat
gagaggaaatgtgagcccatagtcatgacggtgccccgcaagtcggatctgttccaggag
gatctgtacccagacaccgtcggtcccgagccttcagtcgaagccgatgactggttcgat
ggaaaagaagccccgcccatcctgatctctctgaaggacggctttacaacaaccaccaag
gccaaggagttcaaagttctcaagagcctcatgaagaccacgactgcctctgctgggagt
catcaggacagcagcggggaggtccagtccttgaagaaggaggtgaaggatctcaaagca
gctatagaggagctgaccaagcgtgtgagcgagctggagagcaagcattaa
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