Scomber japonicus (chub mackerel): 128378935
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Entry
128378935 CDS
T09718
Name
(RefSeq) serum response factor-like
KO
K04378
serum response factor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128378935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128378935
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
128378935
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
128378935
NCBI-ProteinID:
XP_053194499
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Position
2:8753..14585
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AA seq
422 aa
AA seq
DB search
MGTRTGPGPNSEPDGGSDPESESGSDEDAAGSCGDRRGVKRERSEREVVSTGLQGARPGK
KTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFA
TRKLQPMITSETGKALIQTCLNSPDSPPRSDAGSDQRMSATGFEETDLTYQVSEAEGGGE
GGKDLMKPGFTSSTQASSSSSSSSSSWQPSSVSSNGTLLKTSAGVVLPGGFTLMSGASLP
PGTHTIPLSQLQAPGPPTTLHGPPSQPTTLLRLPATVSLSGGGVSQQLQTIQVQASSQTS
TNQSSSEIHSPAPTAALPASSSSSSVGHMMYPGGHTVMYATPTTSLGDGSLVLNTFSSTG
HGQSHDPASVSQVFLTSLPPVGAQIPVSAVQLHPMVISQQSSSSNLAELQVVSLDVHQAK
DD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagaaccggacccggaccgaactccgagccggacggaggctccgaccctgag
tccgagtccgggtcggacgaggacgctgcgggatcatgcggggacagaagaggcgtgaag
cgggagaggagcgagagggaagtggtgagcaccgggctgcagggagccagacccgggaag
aagacgcggggcagagtgaagatcaagatggagttcatcgataataagctgcggaggtac
acgacgttcagcaagaggaagaccggcatcatgaagaaggcctacgagctgtccaccctc
acaggtacgcaggtgctgctgctggtggccagtgagacggggcacgtgtacaccttcgct
accaggaagctgcagccgatgatcacgtcagaaacaggaaaggctctgatccagacctgc
ctgaactcccccgactcgcccccccgctccgacgccggctccgaccagaggatgagcgcc
accggcttcgaggagaccgacctcacctaccaggtgtctgaggccgagggggggggcgag
ggcggcaaggatttgatgaaaccgggtttcaccagcagcacgcaggcctcttcctcctct
tcctcctcctcttcctcctggcagccgtcctctgtgtcgtccaatgggacgctgttgaag
acgtcagctggtgtagtacttcctggaggcttcaccttaatgtcaggtgcgtctctgccc
cccggcactcacaccatccccctcagccagctgcaggcccccggcccccccaccaccctg
cacggccccccctcacagccaaccacactgctccgtctcccggcaaccgtgtcactgtca
gggggcggagtctctcagcagctgcagaccatccaggttcaggccagcagtcagacgtcc
accaatcagagcagctcagagattcacagccccgcccccacagccgctcttcctgcttcc
tcctcctcctcctcggtgggtcacatgatgtaccccggcggccacacggtcatgtacgcc
acgcccacgacgtcgctaggcgacggaagcctcgtcctcaacaccttctcctccacaggc
cacggccagtcacatgacccagcttcagtctcgcaggtcttcctcacatctcttcctccg
gtcggtgctcagatccccgtttctgccgttcagctgcatccgatggtcatcagtcagcag
agcagcagcagtaatctggcagagctgcaggtcgtcagtctggacgtccaccaagcaaaa
gatgactga
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