Scomber japonicus (chub mackerel): 128379081
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Entry
128379081 CDS
T09718
Name
(RefSeq) BAH and coiled-coil domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
128379081
NCBI-ProteinID:
XP_053194670
LinkDB
All DBs
Position
18:23503959..23564773
Genome browser
AA seq
2912 aa
AA seq
DB search
MEGRDFAAPAHLISERGALVHRAASRIAPSGHSSVQHAGHFPPGKYYPSHIPMAPHSGSG
LMGNSSASFMGTFLASSLGSPPSHPSHPSRPPSSPSSPSFRGGPHSSASQIWFPHSHEAA
PGYPRFSGSLAHTFLPMSHLDHHANSGVLYGQHRFYDTQKENFYLRGLPSQPPLISANHS
LPPMSRAGSGHSQGSCSRDRDPGIVAGLHKGLKEGSVERGVVPVKDKERSSSKQETKERQ
QQQQHHSHQPPQPTHHHHSHSHQQHPHYPQHPLPLEEVNSRALERHKASLTMEYSKEHPQ
SMSKPLSACLHNGKMQNGDAGTGAGAKASMSSCGGEGTALGSMGGGGSSQVRHMGSSGSS
RCTKEGVSGEMRISEQPSDCLERGQAPLHHSLSYSVPPPLHMGSAAGGTHPHPHPHAHPH
THPHPGGFHCLQLHPSHPHHPHHSHHTHHHPDFFCPAPPAPLANPASHERGPANAGREPK
VTGPTFVPSVADLGDKSSGPFQLGNPDCQGVGGGGGGSNTKDKVIEKNGGGGHHSNWHRK
QQQQQQQHPYRKTEKAPEWLQSHHQHIQPSQLPQPPQQQPPHPQQQHQVVRSRSAECINS
GVDMDVFRPSLSQGPKTGHSVPHSVNTSPYRDCSHPGPPPNSSPLGSKSMGQHSGAGATH
GPGPGGSCSLQRDGQKVARIRHQQHGRPGPDAASPAELNQATSQEMKRKMDMSTYGYSNN
SGQQHHHQQPPVPPWAMRPPHHMSQPEEEQRKSYMELGASGGQHSQQQQQQQQGINLPPP
QPPPAPPLSQQQQQQPQQQPEPQGPTQGESSAMKSLLKYSNQQQPLLLSQKSPFGGLGSL
KSGPAGGSCALQGNKQTLPSRKGPANDNERPDYNGRGRDIGEAGHGESEVRQPPVGIAVA
VARQREPTCRSADSHPNSRQGRVHPSVKGPPRSMYPSDPSTEEERKRMSGEQISLTCLDR
EREAYIRDNKERVEFARIHPSNSCHGDLTSHLMVPGGTSLQSGQLGDPTAHSAHHHWMPR
TGSPSLWMTGHSYGIGHTALHQNLPPGFSAAMSGPLQPVLPLPQDPSAQLVVLPTDSPAH
PATHHLDVMEQPGLWPPVYGARGPPSHMQHPAVYSRSQFLRQQELYALQQHQQLQHQHQH
QHQSHQSQQTQPQSQSQQQQQQQQQHRAGHGMDMQHQTTHNAQKRPDETSVELEELISEP
RTSKPAKPYSYNPTQRNTSPPGACTAHLSPCCQSPSLQPHPKSTPSTPCPAPSPAVTAPH
SPAISPAPPQMPKGAESLDKRGEGQPPQDYPESLEPDLPPGYTYPAIAIGYRSGPSPQDV
QLAEPADLEAVQVEPAEHAPQSLSSLGEELDCQAVVRPLPETLPPKEGEQEEEETVVERV
LEQREDVEAAVVTAANYVPGEKEVEEQGPAEEEVLVCPPADSPVCEAASCPVPLSTEDPE
RPEAVITLEEEEDDEAAGEESQVAHAQKVNMPGDQQPELATIIELDPASPAAPEQQSSVP
EEANDHEEQHRNKTSPDDTSVDLVCLSPASASTPSPNQATVTLPHKPLVPCYWSLELLIA
AAFCTDVPPFPLFPFSTPSVAPSQPNPHQGMELLSELADLELQQQRHTCGKSKEEELLMF
DLQSLATLATARALEMGSQEASSTGSGRHFPARRILNLRRKCSWTPRNEPVCPAKGSMET
MDGPELAMRVKLAELQRCYKEKQRELAKLQRKHDHQKEETPRSPARRGPGRPRKRKPTLT
MGPVSSSESQRKVKSMGAGHSLTPEDLGGGGDSQRRKKRLSSRGFERLSSTQIKVQGCRK
SSLHSVLSSKLAVDVAQLKQKAQAKKNFSGMGSRDKEVSPCNSNPKHGHRSQGTSKAEFR
RESGGQSDTAASVDSGPQESWTGLLRRGRKKGSTILTQGSSRLSQPRARALRGQRQEAME
VGESSPPESDSSDQEDEEEDGSYDTDEGQDFRVQPPRDVTSSSSVTGPSPSSVVKLEANQ
KARNKKQRQELYGSQSLSGAEGEVKVRKKPPCRLSLATAVKTHHEDHRPEGVRRPCGPRS
KEPRWGSHGTRGNRYRRSMGLATFPTTSERLKRATRKSTVLRGAINKRRNCWSVQSPSPN
SEEGCRGRRGRDQQPKGRAVSRLLESFAADEGFQMDGSSFSEEEEDNSCSSSKSLEAPNC
VLTKELLTDGLKVLISKEDELLYAARVHTLELPDIFSIVIDGERGNRPKIYSLDQLLQEA
VLDVCPESEAMLTEGTRVCAYWSERSRCLYPGYVRRGGSSDEGKQGGVMVEFDDGDRGKI
SLPNIRLLPPGYQIRCGESPPALLVPSGTTAKRSCSLEQAPISDRPSDRHNTINTVTNNQ
PLTLHKRRPGRPKGSGKKQKQQQAENANKNNSLFLGWPLLANTRKRTSDNPFQLNGTPRK
AMRGKEDDLFPLPQIQPLASTPAKGLFSSSSFEVDSFSSIANGYSSFCTQSTGPGPGLSL
GPRSGLYGQRRRQDELVMPRSRKSGQEFLVKLDHEGVTSPKTKNSKALLMRGGSSSVSGI
PRTEAYSHPVLLVKDNKKGGASRVELLLKGTTPQRKPSASLRLGEYGDLGFSSHRECHSS
YSDLDDEEEEEEERRRAALAAASGGLRTAGRFLSRLSVSSSSSGSSSSSSSGSLSSSSLC
SSDNDSSYSSEDEESSTLMLQSCLSSHRGLLQPTEPSTSSRSHQHSFVAKAVAVSSSKGV
LPEHISNSKSLKRKECSSSTSKPSKDFVKKPRMLPDDTPFIPRPKMSAFLAGRQSWRWSG
NPTQRRGLKGKARKLFYKSIVRGRDTVKVGDCAVFLSAGRPNLPYVGRIENFWESWTSNM
VVKVKWFYHPEETKLGKRHRDGKHALYQSCHEDENDVQTISHKCQVVSREEYECLTRNQK
PNSTSPDLYYLAGTYDPTTGQLVTAEGVSILC
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacgggatttcgctgctccggcgcacctcatatcagagcggggcgccctggtg
caccgagccgcctctcggatcgctccctcgggccacagctctgtgcagcacgccggtcac
ttcccgccggggaaatactacccctcgcacataccaatggctccccactcaggcagtgga
ttgatgggcaattcctccgcctccttcatggggacctttctggccagtagtctgggttcc
cccccttcccacccgtctcacccttcccggccgccctcctcgccctcctcaccttccttc
cggggcggaccccattccagcgcctcgcaaatctggttcccccattcgcatgaagctgct
ccagggtatcctcgattctcagggagtctggcccacactttcctacccatgagccacttg
gatcaccatgccaacagtggagttctctatgggcaacaccgtttctatgacacccaaaaa
gagaacttctatcttcgaggcctcccgtcccagccacctctcatctcggccaatcacagt
ctgccaccaatgtccagggcaggttcaggacactctcaggggtcctgcagcagagataga
gatccagggatagtggcaggtctacataagggtcttaaagagggatccgtggaaagagga
gtagtacctgtcaaggacaaagagaggtccagtagcaaacaggagacaaaggagagacag
cagcagcaacagcaccacagtcaccagccaccccagcccacacaccaccaccattcccac
tcccatcagcagcacccacactatccacagcatccactgcccctggaggaggtcaacagt
cgggcactggagaggcataaggcatcactcacaatggagtacagcaaggaacaccctcag
agtatgagcaagcccctcagtgcctgcttgcacaatggcaagatgcaaaatggagatgca
ggaactggagcaggggctaaggcctccatgtccagttgtggaggggagggcacagccctt
gggtctatgggtggtggggggagcagtcaggtcagacatatggggtccagtggcagtagt
cgctgcaccaaagagggggttagtggggagatgaggataagtgaacaaccctcagactgt
ctggaaaggggtcaggcaccactccaccactctctgtcctactctgtacccccaccttta
cacatgggttctgctgctggagggacacatccccacccacatcctcatgctcatccccat
acacatcctcacccagggggctttcactgccttcagctccaccctagccacccacaccat
ccgcatcattcccatcatacacaccaccacccagactttttctgtccggcccctcctgca
cctctagccaatcctgcctcacatgagagggggccagccaatgcggggcgagaacctaaa
gtcacagggcctacatttgtgccatctgtggcagacctgggggacaaatccagtgggcca
ttccagcttggtaaccctgattgccagggtgtgggcggtggagggggaggcagcaataca
aaggacaaagtaatagaaaagaacggaggcggtggacaccatagtaattggcacagaaag
cagcaacaacagcaacagcagcacccatacagaaagacagaaaaggctccagaatggctg
cagtcccaccaccaacacattcagccctcacagcttcctcaacctcctcaacaacagcct
ccacatccccaacagcagcaccaggttgtacgatcacgcagtgctgagtgtattaacagt
ggtgtggacatggatgtgttcagaccctcactatcccaggggcccaagactggacactct
gtccctcattctgtcaacacttctccttacagagactgttcccatccaggacccccacct
aactcctccccacttggaagtaaaagcatgggtcagcatagtggggctggagccactcat
ggccctggtcctggaggtagctgctccttacagagagatggccaaaaggtagccagaatt
cgccaccagcagcatggcagacctggcccagatgctgcttctccagctgagctgaaccag
gcgactagtcaggagatgaaaagaaagatggacatgtccacttatggttacagtaacaac
agtggacagcagcaccaccaccagcagcccccggtgccaccctgggccatgaggccacct
caccacatgtcacaaccagaggaggaacagaggaagtcctacatggagttaggggccagt
ggtgggcaacattcccagcagcagcaacagcagcaacagggaattaacctgcctcctcct
cagcctccccctgcacctcccctcagtcagcaacagcagcagcagcctcagcagcaacct
gagccccagggcccaactcagggggagagcagtgccatgaaaagcttacttaagtacagc
aaccagcaacagccactgctcctctcccagaaaagtccttttggggggctggggagcctc
aaatcaggtcctgctggggggagctgtgccctacagggtaacaaacagactctaccttcc
aggaagggcccagccaatgacaacgagcgccctgattataatgggcgaggccgggatatt
ggggaagctggtcatggggaaagtgaggtacgacagccaccagtgggaattgcagtggcg
gtggccaggcaaagggagccaacttgtcgttcagcagacagtcatcccaacagccgacag
ggcagggtacatccctctgtgaaaggaccaccacgctccatgtatccctcagatccttcc
accgaagaggaaaggaaaaggatgagtggggaacagataagtctgacttgtttggacaga
gagagagaagcatatatcagggataacaaggaaagggtggagtttgcaaggatccacccc
tccaacagctgtcatggggacctcacctctcatctcatggtgccaggtgggacttccctc
cagtctggccaattaggagatcctactgcacattccgctcaccatcattggatgccaaga
actggaagcccatctctctggatgacaggacactcttatggtataggccatacagctctg
caccagaatctgcccccgggtttttctgcagccatgtcaggccctctacagccagtcctg
cctctgcctcaggacccctctgctcaactggtggtcctgcccactgactctcctgcccat
cctgcaacccatcacctggatgtgatggagcagccagggctgtggccccctgtgtatggt
gcccggggcccaccctcccacatgcaacatcctgctgtgtactcccgatcccagtttcta
cggcaacaggagctgtacgctctccagcagcatcaacagctccagcatcagcatcaacat
cagcaccagagccaccagtcacagcaaacacaaccacagtcccaatcccagcagcagcag
cagcagcagcagcagcatagagctggacatggcatggacatgcaacatcaaaccactcac
aatgcacagaagagaccagatgagacctcagttgaactggaggaacttatttcagaaccc
aggacatctaaacctgccaagccctactcttacaacccgactcagaggaacacctctccc
cctggggcctgcactgctcacctgtccccttgctgtcagtccccgtcactgcaaccacat
ccaaaaagcactccttctacaccttgccctgctcctagccctgctgttacagcccctcac
tcacctgccatcagtccagccccacctcagatgcccaagggggcagaatccctggacaag
agaggagaagggcagcccccacaggactacccagagtctttggagcctgacttgcctcct
gggtacacctaccctgctattgcaattggctacaggagtgggccctccccccaggatgtt
caactggctgagccagctgacctggaagcagtccaagtcgagcctgctgagcatgctccc
cagtctctctccagcctaggggaggagctagactgccaagcagtagtcagacccctccca
gagacactcccacctaaggaaggggagcaggaagaggaggaaacagtggttgagagagtc
ctggaacagagggaggatgtggaggctgcagtggtgacagcagccaactatgtgcctgga
gagaaggaggtggaggagcaggggcccgctgaggaagaggtgctggtttgcccccctgcc
gacagccctgtgtgcgaggctgcttcctgtccagttcccctctcaacagaggaccctgaa
aggccagaggctgtcatcaccttggaagaggaagaggatgatgaggctgcgggtgaggag
agccaggtggcacatgctcaaaaggtcaatatgcctggagaccagcagccagagctggcc
accatcattgagcttgaccctgcttcccctgcagcccctgagcagcagtcctcagtccct
gaggaagcaaatgaccatgaggagcagcacaggaacaagacatcccccgatgacacctca
gtggatttggtgtgtctttcccctgcctcagcttccacccctagtcctaaccaggcaact
gtcaccttgccccacaaacctcttgtgccctgctactggagtcttgagcttctgattgct
gctgccttctgtacagatgtacccccgtttccgttgttccctttcagtacgccatcagtt
gccccatcacagcccaacccccaccagggtatggagcttctgagtgagctggcagatttg
gagctgcaacagcaaaggcacacctgtggaaaaagcaaggaagaggagttgctgatgttt
gacctccagagccttgctaccctggccacagcccgagcactggagatgggctcccaggaa
gccagcagtacaggttcaggccggcacttcccagcccgcagaatcctcaatttacgtagg
aaatgtagctggacacctcgcaatgagccagtgtgcccagctaaaggtagcatggaaaca
atggacggtccggagcttgcaatgcgtgtgaaattggctgagctacagcgttgctacaaa
gagaagcagagggagctggccaagcttcagaggaaacatgatcatcaaaaggaggaaaca
cctcgcagcccagcacgacgaggaccggggcggccaaggaagaggaaacccaccctcact
atgggtccagtgtcctcatctgagagccaaagaaaagtcaagtctatgggggcaggccat
tccctgacacctgaggacctaggagggggtggagacagtcagagaaggaagaagaggctg
tccagtcgaggttttgagcgactcagcagcacacagataaaagtgcagggctgcagaaaa
agcagtcttcacagtgtgctcagctccaagctggccgttgatgtggctcagctcaaacag
aaggcccaggctaaaaagaatttctcagggatgggttccagggacaaggaggtttcgcct
tgcaactccaaccccaagcatggacacagaagccagggcaccagtaaagctgagttcagg
cgagagtcagggggacaaagtgacacagcagccagtgtggacagtggcccccaggagagc
tggactggactgttgcgacgcggacgtaaaaagggaagcaccatcttgacgcagggttcc
tctcgtctgagccagcctagagcgagggctcttcgtggccagagacaagaggcaatggag
gtgggagaaagctcccctccagagagtgactcctctgatcaagaagacgaagaagaggac
ggcagttatgacactgatgaaggtcaagacttcagagtccaaccccccagagatgttact
tctagctcctctgtgacaggtccgagtccctcatctgttgtaaaactagaggccaatcag
aaagcgaggaacaaaaaacagagacaggagctttatggctcccagagtctgtctggagca
gagggggaggttaaagtgaggaagaagcccccctgtaggctgagcctggccactgcagtc
aaaacccaccatgaagatcaccgccctgagggggttaggaggccatgtggaccacgatcg
aaggagcctcggtggggcagccatgggaccagaggcaaccgctaccggaggagcatggga
ctggccacctttccaaccaccagtgagaggctaaagagggcgacacgcaagagcactgtg
ctgagaggagcaatcaataagcggagaaattgctggtctgtccagtccccttccccaaac
agtgaggagggctgcagaggccgaaggggcagggaccaacagccaaaaggacgagcagtg
agtcggctgctagagagctttgctgctgatgagggctttcagatggatggcagcagcttc
tccgaagaagaggaggacaacagctgttcgtccagcaagagtcttgaagctcctaattgt
gtcctgaccaaagaactcttaactgatggactgaaggtgctgatctcaaaggaggatgag
cttctatatgctgccagggtccacactctggagcttccagacatctttagcattgttatt
gatggtgaaagaggaaaccgcccaaaaatctattcattggatcaactgctacaggaagct
gtcctggatgtatgtccggagtcagaggctatgctcactgaaggaaccagggtgtgtgct
tactggagcgaacgttcacgctgcttataccctggctatgttcgcagaggtggttcgtct
gatgaggggaagcaaggaggagtgatggtagaatttgatgatggagacagaggaaagata
tctcttccaaacattcgcctcctgccaccaggataccagattcgctgtggggagtcaccc
cctgctctgctggtacctagtgggacaacagccaagagaagttgcagtttggagcaggcc
ccaatcagtgacagaccttctgacagacacaacactatcaatactgtaaccaacaaccaa
cctcttacacttcataaaagaagaccagggagaccaaagggttctgggaaaaaacaaaag
caacagcaagctgagaatgccaataaaaataattcacttttcttgggttggcctttgttg
gccaacaccaggaagcggacatccgacaatccatttcaactcaatgggacacccaggaag
gccatgagagggaaggaagatgaccttttccccttgcctcagatccagccactggcctcc
accccagccaaagggctttttagcagcagctccttcgaggtggactccttcagcagcatt
gcaaatggctactcctccttctgtactcagtccacaggaccaggtcctggtttatctctg
ggccctagaagtgggctctatggccaaaggcgcaggcaagatgagctggtaatgccgagg
agcaggaagtctggacaagagttcctggtcaagttggatcatgaaggtgtgacctccccg
aagacaaagaacagcaaggctctactaatgcgaggtggatcttccagtgtgagtggtata
cccaggacagaggcttactcacatccggtcctgctcgttaaagacaacaaaaagggtggt
gcctccagggtagaactactcctaaagggaaccacaccccaaagaaaaccctctgcttct
ctgcgtctgggggaatatggagacctgggcttcagctcccaccgggagtgtcacagttcc
tactctgatctggatgatgaagaggaggaagaagaagagaggaggagggctgcactggct
gcagcctcaggaggactaaggacagctggccgtttcctctctcgtctctctgtctcctcc
tcctcctctggttcttccagctcctcctcttcaggctctctctctagttccagcctatgt
tcctctgacaatgactcctcgtacagctcagaggatgaggaaagttctactctgatgctg
cagagttgtctgtcttcccaccgggggctcctgcaacccacggaaccctccacttcttca
aggtcgcaccagcactcctttgtggctaaagctgtggctgtttccagtagcaaaggagtc
ctccctgaacatatctccaacagcaagtccctgaagaggaaagaatgcagcagttccacc
tctaaaccatctaaggattttgtgaagaaacctaggatgcttccagatgacactccattt
attccaaggcccaagatgtctgctttccttgcaggacgacaaagttggaggtggtcagga
aaccctacacagaggcgaggtctaaagggcaaggccagaaagcttttctacaagtccatt
gtgcgaggcagagacacagtgaaagtaggagactgtgctgtgttcctatcagctggacgc
cctaacctcccatatgtaggtcgaattgagaatttctgggaatcctggacctccaatatg
gtggtcaaagtcaagtggttctaccaccctgaagagaccaagctaggcaaaaggcatcga
gatggcaagcatgctctgtaccagtcctgtcatgaggatgagaatgacgtccagacaatc
tctcataagtgtcaggtggtgagcagggaggagtatgagtgtctgactcgcaatcagaag
ccgaacagtacctccccagacctctactacctggctgggacgtatgaccccaccactggt
cagctggttactgctgaaggggtttccatcctttgctga
DBGET
integrated database retrieval system
