Scomber japonicus (chub mackerel): 128379099
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Entry
128379099 CDS
T09718
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sjo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sjo01100
Metabolic pathways
Module
sjo_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128379099 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128379099 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128379099 (xylt2)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
128379099 (xylt2)
Glycosyltransferases [BR:
sjo01003
]
O-Glycan biosynthesis
Glycosaminoglycan
128379099 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
128379099
NCBI-ProteinID:
XP_053194697
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All DBs
Position
18:13018880..13033965
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AA seq
873 aa
AA seq
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MVASARVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDP
KRDGVLWDKQKRNQGRWSSRLERTGGTAASALRRATSRRGGKPSNRLKAPEERGMTGLEG
VVPHDPSSSRNFSEIRGGTEGAAKLPAAAIPGEPGSVDGAHQAPSSDFVPKCDIIGKDAL
SALHRAGTQQCRQEIANIVCQHQAGQLMPDALPQFCPQLGVSNPVQAVGELDNSLSKVDN
PVRVAFVLMVHGRAVRQLKRLMKAIYHRDHYYYIHVDKRSSYMHREVLQIAQQYPNIRAT
PWRMVTIWGGASLLKAYLRSMQDLLSMLDWKWDFFINLSATDFPTRTNDELVAFLSQHRN
KNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERSIPEGLEVSGGSDWFALTRRFVE
YVINSQDDLVSGLKQFYSYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCKCQ
YKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESTVNQEAIEILDTHLYGQYAPGT
IAIKAYWESLFEQSDGVGSLSDVALTAYTSFFRLGLKSLVTTQSNVESCRFEPVGFPLSV
YVYFYDDRFQGYLVRQEVQAVGSKVKETVEMWAVPQATLVLEKNLKEFERLKNLEIGTEW
DPKERIFRNFGGVVGPLDEPLAVQKWARGPNLTATIVWIDPALVVAASYDITVDLDAEYT
QYKPPLQRPLRPGSWTVRVLKQWERVAEVHFLVMPLTFKDKEPLRIEEDSWLHAGPPGNL
YLEQSFQQMSTVLKLPPQEPAMQAAQRNAQMVGQALDAWVDSGVGAFWVIGNLCTTQTSS
CPALAACSKTSWSSLSPDPKSDLGPVKSDGRIR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgctcgagtacagaagctcctccgacgatataaactcgcgattgccgcc
gcattaaccatcctcttgatccaagggcttgtagtatggagtctgagaagtctggaagag
ggcgaggcagagagaaaaacgagacggtctaagctgcctgaccacaacagccaggaccca
aagagagacggcgtactttgggacaaacaaaagaggaaccagggcagatggagctccagg
ttggagagaacagggggcacagcagccagcgcgctgagaagagcaaccagtcgcagagga
gggaagcccagcaacaggctgaaggctcccgaggagcgagggatgacgggattggaaggt
gtagtccctcatgacccctccagcagccgaaacttcagtgaaatccgaggtggcacagag
ggggcggccaagttacctgctgctgccataccaggggagccaggcagcgtggatggggcc
caccaagcccccagcagcgactttgtgcctaaatgtgatatcataggcaaggacgcgctg
tctgccctccatcgcgctggcacacagcagtgccggcaggagatcgccaacattgtctgc
cagcatcaggccgggcagctcatgccagacgcacttccacagttctgtccccagcttggt
gtatcaaatccggtccaggctgtgggtgagctggacaacagcctgtccaaggtggacaac
cctgtcagggtggcttttgttctgatggtccacggtcgagctgtacggcagctcaagcgc
ctcatgaaagccatataccaccgtgaccactactattacattcatgtggacaagcggtcc
agctacatgcatcgggaggtcctgcagattgcccagcagtacccaaacatacgagccacg
ccctggcggatggtcaccatctggggtggtgcgagcctactgaaggcttacctacgcagt
atgcaggacctgctctccatgctggactggaagtgggattttttcatcaatctcagcgcc
acagacttccccaccaggactaatgatgaactggtggcgttcctgtcgcagcacagaaac
aagaacttcctcaagtcccacggcagagagaatgcacggtttattaagaagcagggcctt
gaccgtctcttccatgagtgcgacaaccacatgtggcgtctcggcgagcgcagcatccca
gaaggccttgaggtctccggcggctccgattggttcgcgctcacccgtcgctttgtggag
tacgtcatcaactcccaggatgacctggtgtcagggctgaagcagttctattcctacgcg
ctgctccccgctgagtccttcttccacacggtgctcgggaacagtcacatgtgcgacagc
ctggtggataataacctgcgcgtcaccaactggaaccgtaagctgggctgtaaatgccag
tacaagcacattgtcgactggtgcggctgctcacccaatgatttcaaaccccaagacctc
attaggatccagcaattgacccgtccgacattttttgcccgcaagtttgagtcaactgtg
aaccaagaggccatagaaatccttgacactcacctctatggacagtacgctccgggcact
atcgccatcaaggcatactgggagagcctgttcgagcagtcggacggtgtcggctcactc
agtgatgtggctctcactgcttacacttctttctttcgccttggtctgaagagtctggtg
acaactcagagcaacgtggagtcctgcaggtttgaaccagtaggcttccctctatcagta
tacgtgtacttctatgacgaccgttttcaagggtacctggtccgtcaggaagtccaggct
gtgggatcaaaggtcaaggagacagtagagatgtgggcagtgccccaagccaccctcgta
cttgagaagaaccttaaggagtttgaaaggcttaagaacctggagattggcacagagtgg
gatcctaaagaaagaatctttcgtaactttggtggggtcgtcggtcctttggatgaacca
ctggcagtccagaagtgggctcgtggacccaacctcacagccactatagtgtggattgac
ccggctctggtggtggcagcatcgtacgacatcaccgtggatctagacgcagaatatacc
cagtacaaacctccactgcagcgccccctgcggcccggcagctggactgtacgggtgtta
aaacagtgggagcgagtggcagaagttcattttcttgtcatgcccttaaccttcaaagat
aaggagccactacgaatagaagaggacagctggctccacgcaggtcctccaggtaacctg
tacctggagcagagctttcaacagatgagcactgtgctgaagctgcctccccaggaacca
gccatgcaggcagcccagcgtaatgcccagatggtgggccaggcccttgatgcatgggtg
gacagcggcgtgggggccttctgggtcataggcaacctgtgtaccacacagacttcatcc
tgcccagcattggcagcatgctccaaaacctcctggagctccctgtccccagatcccaag
tctgatctgggccctgtcaaaagtgacgggcgaatcaggtag
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