Scomber japonicus (chub mackerel): 128379206
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Entry
128379206 CDS
T09718
Name
(RefSeq) ankyrin repeat and fibronectin type-III domain-containing protein 1-like
KO
K24478
ankyrin repeat and fibronectin type-III domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128379206
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128379206
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GFIT
Motif
Pfam:
fn3
Interfer-bind
Ig_DSCAM-DSCAML_C
RM3_Med14
DUF6538
Motif
Other DBs
NCBI-GeneID:
128379206
NCBI-ProteinID:
XP_053194825
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Position
18:complement(10053424..10065171)
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AA seq
1088 aa
AA seq
DB search
MSVSVRNPPQRRRSLGPVSPKRIYRNLSVRLRGGESSVGGETDALKHLGKSAEAYKTLWE
AVENEDTLAVQSLLSRDHTNCGGGAGGASLWERGEKKEKDWEREREKGVNRVSDQGLVPL
DVAALTHNSPLLHVLTKAGARHNPVLCRPAEWTLKLDALVELASKRVEERKKELLRKAGA
GPQAQADVHRQIRLWSLRLQLYCRMKHNFQKTEIPGPPSHVSILVTSTSSLFVVIKEPES
DTIGLITRYRVEWSTSSSFKRILCEAQVTETKNPSYSIKGLTAGVQYFVRVSAYNVKGWG
PPQCSTPVSAAPSSWRECIGVKSQLRNQEGLVRKLLEDAREPHYRGFCIERLKPQSPSKR
ISMSRGIKQLFQSATKFVRLLQRGVYLATVFYHKENILLTAEDQLPLVEIQCCSTSITHD
FLWFAKLSCAWQQVPWLQQALFSAHSSPSSLLQNRHNILKAVSQLQSSLGTVDLGQVYYE
PLKDRQGNVLLVTLKEFPNPPSPPDPPLHWMPLSRLEKNRSRTPRLPEPTAMDMLYEQLK
EKMSFHRHSIQWTQPGLYVGILKLCSSVEQIRVLVPQRLPNLLCHTRIRHNAHVSREEWE
WLQSHVYTTVNGSAQNLLSGEDESLIESSGLVDFVRSLRAAVTHLLTKLNIPLYRAYQYG
VYTRELVQFGDKLSMLLLLPPSEDFSSSYWPLVGTKEPGLTMPLQIFELVHFWTYDRDFL
SQYCQAWVRLELDTHLAQQALREALDTKEVQEARERLNHVTELAQRLDGMWRDARWIMDC
LQCVRSKQWVGAVPLGLVMGGDPPPRPDGEEEEESLTARLTWPHRMQSQRAIAESLASVT
PPNVVTTEVPSPAGIVVVPEETALELMEGVAKGGYPVDISAQSTLDLTSVGQSELECAST
LIESGLDPAAVGQLELEVSYTVLNAQDTYSEQQDFPPSITDVIQPMEMAELVDILPTLSL
IEEEIPSGPSTPSMMDMLESFGLGIGENNTFFDLQNSDLNDEAGSLSEPNLHCNNSSSVK
DTHCEKEEESHGEATSASHTLSDTGGDVPRLSWDFPPDATETQQESSKGKSFPVRNQVEW
DRPSNSSS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatccgtgaggaacccaccccagcgccggcgctctctgggtcccgtctcgccc
aaacgtatctatagaaacctgtccgtcagactgaggggtggagagtcgtcggtcggcggg
gaaacggatgcgctcaaacaccttggaaagtccgcagaagcttacaagaccctgtgggag
gcagtggaaaatgaggacactttggctgtacaaagcctgctgtccagagaccacaccaac
tgtggaggaggagcaggaggagcaagcttgtgggagagaggagagaagaaagagaaggac
tgggagagagagagggagaagggggtgaacagggtgagcgaccagggcctggtccccctg
gatgtagctgcccttacccacaactcccctctgctccatgtgctaacaaaggcgggagcc
agacataaccctgttttgtgccgaccagcagagtggacactcaagctggatgctctggtg
gaactggcgagtaaacgtgtggaggagaggaagaaggagttattgaggaaggcaggggca
gggcctcaggcacaggctgatgttcacagacagatccgcctctggagcctcaggctgcaa
ctgtactgccggatgaagcataactttcaaaagacagagatccctggacctcccagtcat
gtttccatactggtgaccagcacatcctctctgtttgtggtgatcaaagaaccagagagt
gacaccataggactcatcacccgctatagagtggaatggagcacctcatccagcttcaaa
cgcatcctttgcgaagcccaagttacagagaccaagaacccctcctatagcatcaaggga
ctcacagcaggagtccaatactttgtgagagtgagtgcctacaatgttaaaggatggggc
ccgcctcagtgctctactccagtcagcgctgccccctccagttggagagagtgcattggt
gtgaagtcacagctcagaaaccaggaaggcctagtgaggaaactgctggaagatgcaaga
gaaccacattacagaggattctgcatagagagattgaagccccagagtcccagcaagcgt
atatctatgtctcgaggcatcaaacaactgttccagtccgccactaagtttgttcgtctt
ctacagaggggagtgtacttggcaacggtgttctaccacaaggaaaacatcctgttgaca
gccgaagatcaactcccactggtggaaatccagtgctgctccacctccatcacccatgac
ttcctttggtttgccaagttgtcctgtgcatggcaacaagtgccctggctccagcaggcc
cttttctcagcacattcatctccctcctccctccttcagaacaggcacaacattttaaag
gctgtttcccagctgcagtcctccctgggaacagtggacctaggccaggtgtattatgaa
cctctgaaagaccggcagggcaatgtactacttgtgactctgaaggagttcccaaaccct
cccagccctcctgaccctccgctccactggatgcccctgtctcgtctggaaaagaaccgc
agcagaacccctcgactgcctgagcccactgccatggacatgctctatgagcagctcaag
gagaagatgtccttccacaggcacagcattcagtggacgcagccgggtctgtacgtgggc
atcctgaaactttgcagctcagtggaacagatcagggtcctggttccacagaggctgccc
aatctgctctgccacacacgaatccgacacaatgcccatgtatccagagaggagtgggaa
tggctccagagtcatgtttacaccacggtcaatggcagtgctcagaacctgttgagtggt
gaggacgagagcttaatagagagcagcgggctggtggactttgtcaggtctctgagagcc
gcagtcactcatctcctgacgaagctcaacatccccctctacagggcatatcagtatggt
gtgtacacccgggagctggtgcagtttggagacaagctgtccatgctgctgctgctgcct
cccagtgaggacttcagctccagctactggcctctggtgggaaccaaggagcctggcctc
accatgcccctgcagatctttgagctggttcacttctggacatacgatcgggacttcctg
tctcagtactgtcaggcctgggtgaggctggaactggacactcatctggcccagcaggct
ctgcgggaggcgctggacaccaaggaagtgcaggaagccagagagcgcctgaaccacgtc
actgagctcgcccagcgtctggatgggatgtggcgggatgcccgctggattatggactgt
ctacagtgtgttcggtctaaacagtgggtgggggcggtgcctctaggcctggtaatggga
ggagacccaccaccacgtcctgatggtgaggaggaagaggagagtttgactgccagactg
acatggccacatcggatgcaatctcagagagccatcgcagaaagtttagccagtgtgact
ccaccaaatgttgtcaccaccgaggtcccctctccagcaggaattgtggtcgtccctgag
gagaccgcactggagttaatggaaggcgtcgccaagggagggtaccctgttgacatcagc
gctcaatcaactttggatctgacgagcgttggccaatcagaattagaatgtgcaagcact
ttaatcgaatctggactggatcctgctgctgttgggcagttggagttggaggtgtcatat
acagttttgaatgcacaggacacctacagcgaacaacaagacttccctcccagcatcact
gacgtaatccagccgatggagatggcggagctggtggatattttgccaacgctgagtctt
attgaggaggagatccccagtggcccatccacaccatcaatgatggatatgctagagagc
tttggactaggcatcggggaaaacaacaccttctttgatttacagaattcagacttgaac
gacgaagctggaagtctgtctgagcccaacctgcactgtaacaacagcagcagtgtgaag
gatacacactgtgagaaggaggaggagtcacatggagaagctacatctgcctctcatacc
ctgagtgatacaggtggtgacgtgcctcggttgagctgggattttcctccagatgcaaca
gaaactcagcaggagtccagcaagggaaagagctttccagtgaggaaccaggtggagtgg
gacagaccatctaacagctcatcctga
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