Scomber japonicus (chub mackerel): 128379245
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Entry
128379245 CDS
T09718
Name
(RefSeq) uncharacterized protein LOC128379245
KO
K04591
adhesion G protein-coupled receptor E1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128379245
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128379245
Peptidases and inhibitors [BR:
sjo01002
]
Mixed peptidases
Family P2
128379245
G protein-coupled receptors [BR:
sjo04030
]
Adhesion receptor family
EGF-like module-containing mucin-like hormone receptor-like (EMR)
128379245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
7tm_2
EGF_3
GPS
FXa_inhibition
cEGF
Plasmod_Pvs28
EGF
Motif
Other DBs
NCBI-GeneID:
128379245
NCBI-ProteinID:
XP_053194844
LinkDB
All DBs
Position
18:13836126..13860521
Genome browser
AA seq
1756 aa
AA seq
DB search
MMNVCVFSLLLGSLFILGHCVFPPGSCDGYQNITQPWRNKAFTSTSFTGYPKDDGHLVGS
WWRFTGIGGDRIISSCIRSSLGGSYYPIYVPSSHPTVESVTPTTGTAYIYYKYIYSYNYY
SLCGSYGRTVSMALCPGGFYVYKPERHPVAHSAYATYHYDCKPDSCGPLAQCNTDGGCVC
VSGYEIPPAHLPTGDSYGCLDIDECQKASETCGPYSSCNNTVGSYNCTCLIGFNATNPAL
PTEHSNPCNDIDECLDNVCGDDGTCDNKPGSYACECHEGYQIVPDATPVCQDIDECFNST
VCGPDSVCTNTPGAHTCACEVGYTPTQPDQEPSENNICLDIDECVKDPAICGPSSNCTNS
IGSYNCTCFIGYRLNNPDVIASLANPCTDIDECSETPGLCGKQTVCTNEPGTYYCSCLDG
FYPSTGILWKMGVSFCQSLQDILDAIVPPEGQTKERAFLCNMDQQLKNNTGVVLPEATVA
NSFSASMEVSGVGPMARSIRVSSERDGETGSVILGISDLLVTAMVSPTQNQTRKAVQTST
VDLSLRTMGPGSHDDISVVLSAKGQTMDINLQSLAEKNNGSAAVAFMTLTGMESLLSHQY
FKTENKTEMYSDVFTAILPSVNHTNLTEPVNFTIQHKKKVPESGIVTCVYWEDKHENNNE
AGKEGETMRWSVEGCWVAYSDENYTVCSCSHLSTFALIMQIGEPPPQDFFLIWLNRICVI
VGLFFFALAILTFLLCSWNPKINNTARLHLCLNLALSHLLLLWNDKYVEHELACTVFAGL
LHFLVTASFVWMQLEALQLYLLVRRLSKVQVIQRDGLPKPLLYLVGYGIPFVIVGVSALV
YSDGYGVTEAGKLILFKILAQFVILGCTWILGLYQTNLSFQVLFIFLNSQQGTFLFIVHC
LLNKEVREEYKRWLTCSCGEDRTVCNTDGGCVCVSGYEIPPTHLPTGDSYGCVDIDECQE
ASKNCGPYSSCNNTVGSYNCTCLIGFNPTNPALPTEHSNPCNDIDECLDNVCGDDGTCDN
KPGSYACECHDGYQIVPDATPVCQDIDECFNSTVCGPDSVCTNTPGAHTCACEVGYTPTQ
PDQEPSENNICLDIDECVKDPAICGPSSNCTNSIGSYNCTCFIGYRLNNPDVIASLANPC
TDIDECSETPGLCGKQTVCTNEPGTFCCSCPDGFFPSTGILWKMGVSFCQSLQDILDAIV
PPEGQTKERAFLGNMDQQLKNNTGVVLPEATVANSLSASMEVSGVGPVARSVRVSSEGDG
ETGSVILGISDRLVAAMVSPTQNQTRKAVQTSTVDLSLRTMGPGNHDDMSVLLSAKGQTM
DINLQSLAEKNNGSAAVAFMTLTGMESLLSHQYFKTENKTEMNSDVFTAILPSVNHTNLT
EPVNFTIQHKKKVPESGIVTCVYWEDKHENNNEAGKEGETMRWSVEGCWVAYSDENYTVC
SCSHLSTFALIMQIGEPPPQSSFLDWLSRMCAIVGLFFFALAILTFLLCSWNPKINNTAR
LHLCLNLALSHLLLLWNDRYVEHELACTVIAGLLHFLVTASFVWMQLEALQLYLLVRRLS
KVQVIQRDGLPKPLLYLIGYGIPFVIVGISALVYSDGYGATEAGVCWLSRRRNFNWALTG
PVFAVIGLNWTVFCATLWSLRPTLANMRSDISQSKDTRLILFKILAQFVILGCTWILGLY
QTNLFFQVLFIFLNSQQGTFLFIVHCLLNKEVREEYKRWLTCSCGEDRTVEKDVPSVSED
LDKPEAQTHQGRKNDE
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgtgtgtgtcttttcacttctcctgggatccctctttatccttggccattgt
gtttttcctcccggttcatgtgatggatatcaaaacataactcagccatggcgcaacaaa
gcatttacatcaacttcctttaccggctaccccaaggatgatgggcatcttgttgggtca
tggtggcgcttcacagggattggtggagacagaatcatttcaagctgcattaggtccagt
ctgggtggttcctattatcccatctatgttccatcttcacatccaacagttgaatctgta
actccaacaacagggactgcatatatctattataaatatatatatagttataattattat
agtttgtgcggtagttacggtcgtacagtgagcatggctctctgtcctggaggattctat
gtatacaaaccagaacgtcacccagtcgcccattcggcttatgcaacctatcattatgat
tgtaaaccagactcctgtggaccacttgctcagtgtaacactgatggaggctgcgtttgt
gtttctgggtatgaaatcccaccagcacacctacccacaggggattcatatggttgtctt
gacattgatgagtgtcaaaaggcttcagaaacctgtggtccttattccagttgtaacaac
actgttggatcatacaactgcacgtgtctgattggattcaatgcaacgaatccagcatta
ccaactgaacattcgaacccatgcaacgatattgatgagtgtcttgacaatgtctgtggt
gatgatgggacgtgtgacaacaaaccaggaagttacgcatgtgaatgccatgaaggctac
cagatagtacccgacgcaactcctgtttgccaagatattgatgaatgtttcaactccact
gtctgtggccctgactctgtttgcaccaacacacctggagctcacacctgtgcatgtgaa
gtggggtacacaccaactcaaccagaccaggaacccagcgagaacaacatctgccttgat
attgatgagtgtgtgaaagatcctgccatctgtggtcctagttccaactgcacaaactca
attgggtcttacaactgtacttgcttcattggttatcgactgaacaacccagatgtgata
gccagcttggctaacccatgcacagatatagatgagtgcagtgagacacctggtttatgt
ggtaaacaaactgtgtgtactaatgaaccagggacatactattgttcttgtctggatgga
ttttatccttcaacaggaatcttgtggaagatgggtgtctcattttgtcaaagtcttcaa
gatattctagatgcaattgtaccaccagagggtcagacaaaagagagagcatttctatgc
aatatggatcaacaacttaagaacaacactggtgtcgtcttacctgaagctacagtggcc
aatagcttttctgcatctatggaagtgtctggtgttggaccaatggccaggtcaatcaga
gttagtagtgaaagagacggggagactggcagtgtgattctgggcatctcagaccttctg
gttactgcaatggtgtctccaactcagaaccaaaccagaaaagcagtgcagacttctaca
gtggatttgagtctacgtaccatgggtcctgggagtcatgatgacatcagtgttgtcctg
tctgccaaaggacagaccatggatatcaacttgcagtctctggctgaaaagaacaatggt
tcagcagctgttgccttcatgacactgactgggatggagagtcttctcagtcatcagtac
tttaaaacagaaaacaagacggagatgtactcggacgtattcacagctatattaccctca
gtaaaccacaccaacctcactgagcctgtcaacttcaccatccaacacaagaagaaagtc
cctgaatctggaatagtgacttgtgtgtattgggaagataaacatgagaacaataatgag
gcaggaaaagagggagagacgatgcgttggtcagtggagggatgttgggttgcatactct
gatgaaaactacacagtgtgcagctgctctcacctttctaccttcgctctcatcatgcaa
attggagagcctccaccgcaggattttttcttaatttggctgaaccgaatatgtgtgatt
gtcggacttttcttctttgctttggccatcctcaccttcctactgtgtagctggaacccc
aagatcaacaacacagcccgtcttcatctctgcctcaacctcgccttgtctcatctgctg
ctgctgtggaatgacaaatatgttgaacatgagctggcctgcactgtttttgcagggtta
ctccacttcttagttactgcaagttttgtgtggatgcagcttgaagccctacagctttac
ctgctggtccgaaggctctccaaggtgcaggtgatccagagagatggcctccccaagccg
cttctctacctggttggctacggtattccatttgtgattgtgggtgtttctgcactggtg
tactctgatggatatggtgtcactgaggcagggaagttgattttgttcaagatcctggcc
cagtttgtcatactgggctgtacttggattctaggcctgtaccaaacaaacctttccttc
caggtcctcttcattttcctcaattcccagcagggaaccttccttttcattgtacactgt
ctgctcaacaaggaggtgagagaagagtacaaaagatggctgacatgctcttgtggagag
gatcgcactgtgtgtaacactgatggaggctgcgtttgtgtttctggttatgaaatccca
ccaacacacctacccacaggggattcatatggttgtgttgacattgatgagtgtcaagag
gcttcaaaaaactgtggtccttattccagttgtaacaacactgttggatcatacaactgc
acgtgtctgattggattcaacccaacaaatccagcattaccaactgaacattcgaaccca
tgcaacgatattgatgagtgtcttgacaatgtctgtggtgatgatgggacgtgtgacaac
aaaccaggaagttacgcatgtgaatgccatgatggctaccagatagtacccgacgcaact
cctgtttgccaagatattgatgaatgtttcaactccactgtctgtggccctgactctgtt
tgcaccaacacacctggagctcacacctgtgcatgtgaagtggggtacacaccaactcaa
ccagaccaggaacccagcgagaacaacatctgccttgatattgatgagtgtgtgaaagat
cctgccatctgtggtcctagttccaactgcacaaactcaattgggtcttacaactgtact
tgcttcattggttatcgactgaacaacccagatgtgatagccagcttggctaacccatgc
acagatatagatgagtgcagtgagacacctggtttatgtggtaaacaaactgtgtgtact
aatgaaccagggacattctgttgttcttgtccggatggattttttccttcaacaggaata
ttgtggaagatgggtgtctcattttgtcaaagtcttcaagatattctagatgcaattgta
ccaccagagggtcagacaaaagagagagcatttcttggcaatatggatcaacaacttaag
aacaacactggtgtcgtcttacctgaagctacagtggccaatagcttgtctgcatctatg
gaagtgtccggtgttggaccagtggccaggtcagtcagagttagtagtgaaggagacggg
gagactggcagtgtgattctgggcatctcagaccgtctggttgctgcaatggtgtctcca
actcagaaccaaaccagaaaagcagtgcagacttctacagtggatttgagtctacgtacc
atgggtcctgggaatcatgatgacatgagtgtcctcttgtctgccaaaggacagaccatg
gatatcaacttgcagtctctggctgaaaagaacaatggttcagcagctgttgccttcatg
acactgactgggatggagagtcttctcagtcatcagtactttaaaacagaaaacaagaca
gagatgaactcggacgttttcaccgcaatattaccctcagtaaaccacaccaacctcact
gagcctgtcaacttcaccatccaacacaagaagaaagtccctgaatctggaatagtgact
tgtgtgtattgggaagataaacatgagaacaataatgaggcaggaaaagagggagagacg
atgcgttggtcagtggagggatgttgggttgcatactctgatgaaaactacacagtgtgc
agttgctctcacctttctaccttcgctctcatcatgcaaattggagagcctccaccacag
agttctttcttagactggctgagccgaatgtgtgcgattgtcggacttttcttctttgct
ttggccatcctcaccttcctcctgtgtagctggaaccccaagatcaacaacacagcccga
cttcatctctgcctcaacctcgccttgtctcatctgctgctgctgtggaatgacagatat
gttgaacatgagctggcctgcactgttatagcagggttactccacttcttagttactgca
agttttgtgtggatgcagcttgaagccctacagctttacctgctggtccgaaggctctcc
aaggtgcaggtgatccagagagatggcctccccaagccgcttctctacctgattggctac
ggtattccatttgtgattgtgggtatttctgcactggtgtactctgatggatatggtgcc
actgaggcaggggtgtgctggctttcaagacgtcgcaatttcaattgggctttaacaggc
cctgtgtttgctgtcattggacttaattggacagtgttctgcgctacattatggagtctg
agacccaccttggccaacatgagaagtgatatttctcaatccaaagacaccaggttgatt
ttgttcaagatcctggcccagtttgtcatactgggctgtacctggattctaggcctgtac
cagacaaaccttttcttccaggtcctcttcattttcctcaattcccagcagggaaccttc
cttttcattgtacactgtctgctcaacaaggaggtcagagaagagtacaaaagatggttg
acatgctcttgtggagaggatcgcactgtggagaaagatgtaccttcagtctctgaagac
ctggacaagcctgaggcacaaacacatcaggggagaaaaaatgatgaataa
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integrated database retrieval system
