Scomber japonicus (chub mackerel): 128379259
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Entry
128379259 CDS
T09718
Symbol
hrob
Name
(RefSeq) homologous recombination OB-fold protein
KO
K27803
homologous recombination OB-fold protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128379259 (hrob)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128379259 (hrob)
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Gene cluster
GFIT
Motif
Pfam:
HROB
Motif
Other DBs
NCBI-GeneID:
128379259
NCBI-ProteinID:
XP_053194859
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Position
18:17474296..17488044
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AA seq
624 aa
AA seq
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MATCKLSGLFSIGEDFDDEDLLGTDWAARSASGPADVAAAVSSCTLRASSVARTEPEKNC
PQQTGERSAAPCNGTASKSSTHTAAGQIVSVGLRQLSSSSSSSAQTHSSHPTTLNISQPN
VASQQSHANIETIQKSCAAQDDFDDWDVDLADLDECDSLLQPPAPSPPRPTVEHVSSAKT
LRPPTGGGIQRPPAGGLRGLSTAHQSFSSSSHTPPPHQSFSSSSHTPPPRTFSAAHVRSL
NPRPAQLSTPPQSPGVFPGLTAMSPCPSPLPRTLNRPQQPQRQWATPGPSNQTRTLFETV
SPRPQSSPTLSPHPLATPVLTNRLVQLVSASSKLPKKRPRSEPLRPRTRRFPGPAGLLPE
QPQGQSLDDIVVSVPQTPAHGAVARLPSQGSSSQTDEEDFSGGAWAAMKAEMGLDERNPS
CFLQSYSVVMVLRKAALKQLAKNKVPNMAVLLKSIIHTHADAKAVFKDPTGEIQGTVHRR
LLEDRVGELKVGAVLLLKQVGVFSPSHRNHYLNVTPNNLLRIYSPDGVSLSSTQLPPLVL
ESTLSPARSPAYLRETVSQMQLVFDDDDNDGQGEGNFADPQVPRDTTANSSKGPQEPAPQ
DSGWDADDDLDELLGELPEDTYSF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttgcaaattaagtggcctcttcagtattggtgaggactttgatgatgaggac
ctgctcgggacagactgggcagcccgctcagcgtctggaccagccgatgtggcagctgct
gtgtcatcctgtacgctgcgtgcctcctctgtcgctcgcacagagccggagaaaaattgc
ccgcagcaaactggagagagatcagctgccccgtgtaatggcacagcatcgaagagcagc
acgcacactgctgctggacaaattgtttctgtgggtttgagacagctctcctcctcctcc
tcctcctctgctcagactcactcctcccatcccaccacactgaatatctctcagcctaat
gtggcatcacagcagagtcatgccaacattgagacaatacagaagtcctgtgcggctcag
gatgattttgacgattgggatgtcgacctggcagatctggatgagtgtgacagcttgctt
caacctccagctccatccccacccaggcctacagttgagcatgtatcttcagccaaaacg
ctgcggcccccaactggtggaggcattcaaaggcctcctgcagggggtttgagagggctc
agcactgcacaccagtcattcagctcatccagtcacacgccgcctcctcaccagtcattc
agctcatccagtcacacgccgcctcctcggaccttttctgcagctcatgtccgatctctg
aatccccgcccggctcaactgtcaacccctccacagagtccaggcgttttcccaggcctt
actgcaatgtccccatgccccagccctctccccaggacactaaacagaccccagcagcca
cagagacagtgggcaactccaggaccctcaaatcagacccgcaccctctttgagactgtt
tctccaaggccccagagctcccctactctgagcccacacccccttgccacaccggtcctc
accaatcgtctagtccagctggtatctgcatctagtaagcttcccaagaagaggcctcgc
tctgagcctcttcggcccaggaccagacgcttccccggccccgctggactcctgccagag
cagccgcagggtcaaagcctggatgacatcgtcgtgtctgttcctcagactcccgctcac
ggcgctgtggcccggttgccaagccagggttccagctcccagaccgatgaagaggacttc
agcggcggcgcctgggcagcgatgaaggcagagatgggattggacgagaggaacccgtcg
tgtttcctgcagtcatacagcgtggtcatggtgcttcgaaaggctgcactcaaacagctg
gcaaaaaacaaagtgcccaacatggcggtgctgctgaagagcatcatccacacacatgct
gacgccaaggctgtgttcaaagacccaacaggggagattcagggaacggtgcatcgccgt
ctcttagaggacagagtgggggagctgaaggtcggagctgtgctgcttctcaaacaagtg
ggtgtgttttccccctcccatcgcaaccattacctaaacgtgacgcctaacaacctgctg
aggatctactcccccgatggagtcagcctgtcctccactcagctgcctcctctcgtcctg
gagtcgacgttgtctcccgctcggtcaccagcttacctccgggagacggtgtctcaaatg
cagctggtgtttgatgacgatgacaacgacggacaaggggaggggaatttcgcagacccc
caagtcccgagagacactacagcgaactcaagcaaaggcccccaagagccagcacctcag
gactcgggctgggatgcagacgacgacctggatgaacttctgggagagttacctgaagac
acctacagcttttga
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