Scomber japonicus (chub mackerel): 128379371
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Entry
128379371 CDS
T09718
Symbol
spns1
Name
(RefSeq) LOW QUALITY PROTEIN: protein spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128379371 (spns1)
Transporters [BR:
sjo02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
128379371 (spns1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
MFS_4
Motif
Other DBs
NCBI-GeneID:
128379371
NCBI-ProteinID:
XP_053194963
LinkDB
All DBs
Position
18:complement(29253815..29270971)
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AA seq
497 aa
AA seq
DB search
MSLGEAASDSVPFFSDDSEAEGAEERSGAGGARRGEEEEEESPSGVSKVRALLTVFILCY
INLLNYMDRFTVAGVLPDIEQYFGIDDEKSGLLQTVFICSYMFLAPLFGYLGDRYNRKFI
MSFGITFWSLVTLASSYTPKDHFWALLLTRGLVGVGEASYSTIAPTIIADLYVKGKRTNM
LSIFYFAIPVGSGLGYIVGSQVSAVAQDWHWALRVTPGLGIIAVLLLLFVVKEPKRGAIE
ARPEHHLHQTSWLTDLQALSKNRSFLFSTLGFTXVAFVTGSLALWAPTFLFRAXVFTGEK
SPCVEGHCASDDSLIFGIITCVTGVLGVASGVQVSRQLRKKTARADPLVCAAGLLLSAPF
LYLAIVFAQASTIATYVFIFFGETFLSMNWXIVADILLASSFSLISTTSCSLQLTAQVQG
SYINPHSRTRSLQQSCEVALQLAGLVSHTSTLITCSLPQSQCHSFITHQLLFNNFSVFSV
ELQEADALLHLDKHDPS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgggcgaggcggcgtcggactcggtgccgttcttctctgatgacagcgaggcg
gagggggcggaggagcggagcggcgcggggggagcgcggcggggggaggaggaagaggag
gagtcgcccagcggagtgtcgaaggtgcgagcgctgctgaccgtcttcatcctctgttac
atcaacctgctcaactacatggaccgcttcaccgtggcaggtgttcttcctgacatcgag
cagtactttggaatagatgacgagaagtccggtttgctccagacggttttcatctgcagc
tacatgtttctggctccgttgttcggttacctcggcgacaggtacaacaggaagttcatc
atgagcttcggcatcacgttctggtctttagtgactctggccagctcctacactcctaaa
gaccatttctgggctctgctgctgacccgaggtttggtgggggtgggggaggccagctac
tccaccatcgctcccaccatcatcgcagacctctacgtcaaagggaagaggaccaacatg
ctctccatcttttacttcgccatcccagtgggcagtggtctggggtacatcgtggggtca
caggtcagcgctgtggcacaggactggcactgggctctgagggtgactccaggtttgggg
atcatagcggtgctcctgctgctgttcgtggtcaaagagcctaaacgaggagccatcgaa
gctcgaccggagcatcatcttcatcagaccagctggctgaccgacctgcaggcgctcagc
aagaaccgcagcttcctgttctccacgctgggcttcacgnccgtggccttcgtcaccggc
tcgctggctctctgggctccgacgttcctgttcagagcgngcgtgttcaccggggagaag
agcccctgcgtggagggacactgcgcctccgacgacagtcttattttcggcatcatcacc
tgcgtgacgggcgtgctgggcgtggcgagcggcgtgcaggtgagccggcagctgaggaag
aagacggcgagggcggacccgctggtgtgcgccgccggcctgctgctgtccgctccgttc
ctctacctggccatcgtgttcgctcaggccagcaccatcgccacatacgttttcatcttc
ttcggagagacgttcctgtccatgaactggngcatcgtggccgacatactgctggcctcc
tccttttctctaatttccaccaccagttgcagtttgcagctcacagctcaggttcagggc
agttacatcaacccacacagtcgcacccgctcactgcaacagagctgtgaggttgccttg
cagcttgctggtttagtgagtcacacatccacactcatcacctgcagcctgccacagtca
cagtgtcacagcttcatcactcatcagctgctttttaacaacttttctgtgttttctgtg
gagctgcaggaagctgatgctctgcttcatctggacaaacacgacccgagctga
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