Scomber japonicus (chub mackerel): 128379392
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Entry
128379392 CDS
T09718
Symbol
zgc:158376
Name
(RefSeq) F-box/LRR-repeat protein 19
KO
K10285
F-box and leucine-rich repeat protein 19
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128379392 (zgc:158376)
04121 Ubiquitin system [BR:
sjo04121
]
128379392 (zgc:158376)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
128379392 (zgc:158376)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128379392 (zgc:158376)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
AppA_SCHIC
SLM4
Motif
Other DBs
NCBI-GeneID:
128379392
NCBI-ProteinID:
XP_053194983
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Position
18:30750838..30765524
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AA seq
894 aa
AA seq
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MSGSKALGGGAGGGARRRRTRCRRCQACMRTECGECHFCKDMKKFGGPGRMKQSCLLRQC
TAPVLPHTAVCFACGEAGKEDTVDSEEEKFSLSLMECTICNEIIHPSCLKMGKAEGIIND
EIPNCWECPKCHKEGKTSKEADGSGKRRLDNGEVGRWKLTDDPPPKKKAPPSLEEAGRGE
GGHKRKKEKELPPDSGPKKKMKGAHEKRLKKKPKPEAVESNGPTSSAGGAGGLQSSSTSS
SSQAGGGGGGAGGAGGTSSADQRSHHREKLERFKRMCLLERRPESSSSSSSSSESDSESD
SDDSLPGEQGGGSSPSSSSPAPPPPVVYGNSSGSRADRERSRSERERERERERRLAELGF
SASDDSEGEGGRGEEEEREEEQGGGADKARRRGGETGLLPRGRKGAMMDAEEEDTPTSDR
TRKNSSSLPPPSPLSSNQMPPSSQHDGFTGKQRSNGQEARNGRTRGGTGGGREGGEKENA
SGVLTNHRHGGGGGGGTKGSRGNKIRSNSKNQTSGSRSISSSSSSSIPTSNGGGGGGAGG
GGLLMSAMAASPCSQPSRLAPRSQMMKRSPPAVPSPPRPVQMERHLVRPPPACPEPSCLP
LDSGSAHIMTRDVWLRVFTHLSQRELCVCMRVCRTWSRWCCDKRLWTQIDLSRQRSITPP
MLSGIIRRQPVSLNLGYTNISKKQLMWLINRLEGLLELNVSGCSWPAVSALCQAVCPCLR
LLDLSRVEDLKDSHLRELLAPPPDTRTAHGETRVGRFQNVTELRLAGLDLTEASSRLLVR
YVPRLVRLDLSQCLNITDQTIHTLTSPISPLRESLTHINLAGCLKVTEQCVPLLRRCTSL
QTVDLRSCSLLSSETGQLLSFPTHASSTSSSSSTASSSYQGNEPRLPPPYTTDR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagtaaggcgctgggcgggggggctggcgggggggcgaggcgcaggcggacg
cggtgccggcgctgccaggcctgcatgaggacggagtgtggagagtgtcacttctgtaaa
gacatgaagaagttcggaggaccgggacgcatgaagcagtcctgtctgctgagacagtgc
acggcgccggtgctccctcacacagccgtgtgctttgcgtgtggagaagcagggaaagaa
gacaccgtcgactcagaagaagagaagttcagtctgtctctgatggagtgcaccatctgc
aacgagatcatccaccccagctgcctcaagatgggtaaagctgaaggaatcattaatgat
gaaatcccaaactgctgggaatgtccaaagtgccacaaagagggcaaaaccagtaaggag
gcggacggctcggggaagcggcggctggataacggcgaggtcggccgctggaagctcacc
gacgatccgcctcccaaaaagaaagcacctccttccctggaggaggcggggaggggggag
ggggggcacaagaggaagaaggagaaggagctgcctccagacagtggacccaaaaaaaag
atgaaaggagctcacgagaaacgtctgaaaaagaaacccaaaccggaggcggtggagtcc
aacggtcccacctcctcagctggcggagctggaggactgcagagctcctccacctcgtcc
tcctctcaggcggggggaggcgggggaggagcggggggagcgggggggacgtccagtgca
gaccagcgctcccatcacagagagaagctggagcgctttaagaggatgtgtctgctggag
cgccggcccgagtcctcctcttcctcctcctccagctccgagtccgactcggagtccgac
tccgacgactccctgccgggggagcagggggggggctcctcgccgtcctcctcctcgccg
gccccgcctcctcccgtcgtctacggcaacagcagcgggagccgggcggacagggagagg
agtcgcagcgagcgggagcgagagagggagcgggagcggcggctggccgagctgggcttc
agcgccagcgacgactcggagggggagggggggaggggggaggaggaggagcgggaggag
gagcagggagggggggcagacaaggcccggcggagaggaggggagacggggctgctgccg
cgggggcgcaaaggagcgatgatggacgcagaggaggaggacacgcccacctcagacagg
acccgcaaaaactcctcctccctccccccgccctcccccctctcctccaatcagatgcct
ccgtcctcgcagcacgacggcttcacggggaagcagcgcagcaacgggcaggaggcgcgc
aacgggcggacacggggaggaacaggaggggggagagaggggggggagaaggagaacgcc
agcggtgttctgaccaatcacagacacggcgggggaggagggggcgggactaaaggcagc
cgcggcaacaagatccgtagcaacagtaagaaccagacgtccggctccagaagcatcagc
tcctcctcgtcctcctccatccccacctccaacggggggggcggggggggcgcgggggga
ggcggcctgctgatgtcggcgatggcggcgtcgccgtgctcgcagccgtcccgcctcgcg
ccgcgctcgcagatgatgaagcgcagcccgccggcggtgccgtcgccgccgcggcccgtc
cagatggagcggcacctggtgcgccccccccccgcctgcccggagccgtcctgcctgccg
ctggactctggctccgcccacatcatgaccagagacgtctggctgcgagtcttcacacac
ctgagccagagagagctgtgcgtctgcatgagggtctgccgcacctggagccgctggtgc
tgtgacaagcggctgtggactcagatcgacctgagccggcagcgctccatcacccccccc
atgctgagtggtatcatccgccgccagcccgtctcactcaacctgggttataccaacatc
tccaagaaacagctgatgtggctcatcaaccgcctggaaggtctcctggagctgaacgtg
tctggctgttcgtggccggccgtctccgctctgtgtcaggccgtctgtccttgtctccgg
ctgctggacctcagcagagtggaggacctgaaggactcccacctgagagagctgctggcc
cccccacctgacaccaggacagcccacggtgaaaccagagtggggcggttccagaacgtg
acggagctgcgattggccggcttggacctgacggaggcgtcgtcccgcctgctggtgcgc
tacgtcccccggctcgtcagactggacctgagccagtgtttgaacatcactgaccagacg
atccacacgctcacctcccccatctcccccctcagagagagcctcacccacatcaacctg
gcaggttgtctgaaggtgacggagcagtgtgtccctctcctgcgtcgctgcacctccctg
cagacggtggacctgcgctcctgctccctcctctcctctgagaccggacagctcctctcc
ttccccacccacgcctcctccacctcctcctcctcctccaccgcctcctcctcttaccag
ggcaacgagccccgcctcccacctccttacactacagacaggtga
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