Scomber japonicus (chub mackerel): 128379404
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Entry
128379404 CDS
T09718
Symbol
itga2b
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
sjo04518
Integrin signaling
sjo04810
Regulation of actin cytoskeleton
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128379404 (itga2b)
04518 Integrin signaling
128379404 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128379404 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128379404 (itga2b)
04810 Regulation of actin cytoskeleton
128379404 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128379404 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128379404 (itga2b)
04515 Cell adhesion molecules [BR:
sjo04515
]
128379404 (itga2b)
04090 CD molecules [BR:
sjo04090
]
128379404 (itga2b)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128379404 (itga2b)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128379404 (itga2b)
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin alpha subunits
128379404 (itga2b)
CD molecules [BR:
sjo04090
]
Proteins
128379404 (itga2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
PH1_SSRP1-like
Qn_am_d_aIII
Motif
Other DBs
NCBI-GeneID:
128379404
NCBI-ProteinID:
XP_053194995
LinkDB
All DBs
Position
18:<31328217..31349558
Genome browser
AA seq
1014 aa
AA seq
DB search
VLVCVSVCVCLNLQDEAVTFSGPTGSLFGFSADFHTFNNKSFVVIGAPKANTSQSGVIEG
GGVFLCPWSPDGGNCDIIDFDAEGDEVYLRDSLEFKSFKSRQWLGASVLSVSNTHLLACA
PLFHWNVHSGGAESGKTPVGNCLLLDQSTGSSLPFSPCRGNMMDDTYKLMMNRHDQRYCE
VGFSSDITKDGRLLLGAPGGFFFQGQVFSVGVSDIINSGQINTPPQLVSGMSQTDEKGKY
DVYHGYSVSSGLLTGDSITDFVVGVPNDRNTAGSVKIYDGRSSGSLTVHHQFQGAQVASY
FGHSVAVVDINGDGLDDVLVGAPLFMDRVTEQLQERGQVVLYLQRRHAPFPSHPDQSLIG
SALYGRFGSALAALGDLDVDGYQDIAVGAPWSXGGGGQVFIYLGNSNGLSATPSQVIDSP
LPSSRAAFGFSLRGGADIDGNGYPDLLVGAWSADRAFVYRSQAVIRSRVSVSLLPDFLNP
DVKLCDGQHAPVSCFIIQMCVRVSGHRIPQQTALRVELQLDRMKQPTTRRTLLLLTNQPQ
ETSTLLVQREGGGACFNRTAYLRSEEEVRDKLSPIFITVNISLLNTTQNALLHGQTHAAA
QTRIILDCGEDNVCVPDLKLDARLVSDSVLVGEDQSVVLSVSAENVGEGAYETELVVQIP
QHTHFQSSQGVDRLVCVQRKENQTVIVTCDLGNPMRQGHTLKTDLVFNVGHLEEVESHIT
FNLRIRSKNSVNSSSNEISVDVRVKAEAKLQIRGGSSPPEVVLPLPDWQPAMHPGSLEEL
GPLVEHVYELRNQGPGAVNARLTVDFPSSWRRHFLLYVVSDAAEDSLTCRTLNASQIDPF
QLVGNSSRVSVVSPLIQEEETDSLTQTQHVRCGSSDTVCVRFVCDVTALGRGSSAVVRIS
ARLWTHTLTQTPYLNYELVSSASYDVINTTSRVQPLLLPSGHTQTQLSVLWRPPDGEKEV
PIGYIVLSIISGLLLLGLLCFIFWKLGFFRRVRPPTDDEDEEEEDEDERQQCLE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgtgtgtgagtgtgtgtgtgtgtctgaacctgcaggatgaagccgtgacgttc
agcggaccgacaggaagtctgtttggattctctgccgactttcacaccttcaacaacaag
tccttcgttgtgattggagctcctaaagccaacaccagccaatcaggagtgatcgaggga
gggggcgtgttcctctgtccgtggtcacctgacggcgggaactgtgacatcatcgacttc
gacgcggaaggtgacgaggtctacctcagagactcgttggagttcaaaagtttcaagagc
cgtcagtggttaggagcctcagtcctctctgttagtaacacacacttactggcgtgtgct
ccgctcttccactggaacgtgcacagcgggggggcggagtcagggaagactcctgtggga
aactgcctcctattggaccagagcacaggaagttccctccccttctcgccctgcagagga
aacatgatggacgacacctacaagctgatgatgaacagacatgaccagcgctactgtgag
gtcggcttcagctctgacatcaccaaggatggacggctgctgctcggagctccgggaggc
ttcttcttccagggtcaggtgttctcagtgggtgtgagtgacatcatcaacagtggacag
atcaatactccaccacaactagtgtctggcatgagccaaacagacgagaagggaaagtat
gacgtttatcacggttactccgtatccagcggtctgctgactggagactccatcacagat
tttgtggtcggagttccaaatgacagaaacacggcgggatcagtgaagatctacgacggc
cggagcagcggctctctgacggtccaccaccagtttcaaggagctcaggtggcgtcatac
ttcggacacagtgtggctgtggtcgacatcaacggtgacgggttagacgatgttctggtg
ggagctcctctcttcatggaccgagtgacggagcagctgcaggaacgaggacaggtggtt
ttgtacctgcagaggagacacgcccccttcccctcccatcctgaccaatcactgatcggc
tccgccctgtacggccggtttggctccgccctcgccgcgctgggagacctggacgtggac
ggttaccaagacatcgccgtgggggctccctggtcannggggggggggggccaggtgttc
atctacctggggaacagcaacggtctctcggccacgccctcccaggtgattgacagcccg
ttgcctagcagcagggcggcgttcggcttctcgctgaggggcggggccgacatcgacggg
aacggatacccagacctgctggtgggggcgtggagcgcagacagagccttcgtctacagg
tctcaggcggtgatccggtccagagtttcagtctctctgctgccagacttcctgaatcca
gacgtgaagctgtgtgacggacagcacgcgccggtctcctgttttataatccagatgtgc
gtccgcgtgtccggccacaggatccctcagcagacagcgttgagggtggagctacagctg
gacaggatgaagcagccaaccacacgccggaccctgctgctcctgaccaatcagccgcag
gagacgagcacgctgctggtccagagggaagggggcggggcttgcttcaaccggaccgcc
tacctgaggtctgaagaggaagttcgggataaactgagtccgatcttcatcactgtcaac
atcagcctcctcaacactacccagaatgctttgctgcacgggcaaacacacgctgctgct
cagaccaggatcattctggactgtggtgaagacaacgtgtgtgttcctgatctgaagctg
gacgctaggctcgtgtcagacagcgttctggtcggtgaggatcagtcggtggtcttgtcc
gtctcagcggagaacgtcggggagggagcgtacgagaccgagctggtggtccaaatccca
caacacacacacttccagagcagtcagggtgtggaccggctggtgtgtgttcagaggaaa
gagaaccagaccgtcatcgtgacctgtgacctcggaaaccccatgagacaaggacacaca
ctgaagacagatcttgtgttcaatgtcggtcacctggaggaggtggagtctcacatcacc
ttcaacctcaggatcaggagtaagaactcagtgaattcgagcagtaatgagatctcagtg
gatgttcgggtgaaagctgaagcgaagctgcagatcagaggaggctcctcccctcctgaa
gtagtcctgcccctccctgattggcagcctgcaatgcatcctgggagtttagaggaattg
ggtccattggtggaacacgtgtacgagctgaggaaccagggtcccggcgccgtgaacgcc
cggctgaccgttgacttcccgtcgtcatggcgacgacacttcctgctctacgtcgtctcc
gacgcagccgaggattccctgacctgcaggaccctgaacgcatcgcagatagaccccttc
cagctggtggggaactcctcccgtgtgtctgtcgtgtctccgctgatccaggaggaggaa
acagactcgctcacacagactcaacatgtgcgttgcggcagcagtgacacggtgtgtgtc
aggttcgtgtgtgatgtcacggcgttgggtcgaggttccagcgctgtggtccgaatctct
gctcgactgtggactcacacacttacacagactccgtatctgaactatgagctcgtgtcc
tccgcctcctatgatgtcatcaacacaacatcgagggtccaaccactgctgctgccaagt
ggacacacacagactcagctcagtgtgttgtggcgtcctcctgatggagagaaagaggtt
cctattggctacatcgtcctgtcaatcatctctgggctgctcctcctcggcctgctgtgt
ttcatcttttggaagctgggtttctttaggcgtgttcgcccccccactgatgatgaagat
gaagaggaggaggatgaagatgagaggcagcagtgtctggaataa
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